Protein–RNA interactions for Protein: P29704

ERG9, Squalene synthase, yeastyeast

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ERG9P29704 snR52snR52 92 nt-0.28□□□□□ -2.45
ERG9P29704 RPM2YML091C 3609 nt-0.28□□□□□ -2.46
ERG9P29704 SBH2YER019C-A 267 nt-0.31□□□□□ -2.46
ERG9P29704 YOR329W-AYOR329W-A 210 nt-0.31□□□□□ -2.46
ERG9P29704 snR46snR46 197 nt-0.31□□□□□ -2.46
ERG9P29704 snR39BsnR39B 96 nt-0.32□□□□□ -2.46
ERG9P29704 YPL060C-AYPL060C-A 3315 nt-0.33□□□□□ -2.46
ERG9P29704 YJL077W-AYJL077W-A 87 nt-0.33□□□□□ -2.46
ERG9P29704 YLR342W-AYLR342W-A 174 nt-0.34□□□□□ -2.46
ERG9P29704 YGR146C-AYGR146C-A 162 nt-0.36□□□□□ -2.47
ERG9P29704 tQ(UUG)QtQ(UUG)Q 76 nt-0.37□□□□□ -2.47
ERG9P29704 snR69snR69 101 nt-0.38□□□□□ -2.47
ERG9P29704 snR48snR48 113 nt-0.42□□□□□ -2.48
ERG9P29704 PMP2YEL017C-A 132 nt-0.44□□□□□ -2.48
ERG9P29704 YML100W-AYML100W-A 174 nt-0.44□□□□□ -2.48
ERG9P29704 YDR406W-AYDR406W-A 246 nt-0.45□□□□□ -2.48
ERG9P29704 YIL071W-AYIL071W-A 477 nt-0.46□□□□□ -2.48
ERG9P29704 tL(UAA)QtL(UAA)Q 85 nt-0.47□□□□□ -2.48
ERG9P29704 RDS3YPR094W 324 nt-0.48□□□□□ -2.49
ERG9P29704 YHL015W-AYHL015W-A 84 nt-0.5□□□□□ -2.49
ERG9P29704 YNL067W-BYNL067W-B 141 nt-0.51□□□□□ -2.49
ERG9P29704 YDL007C-AYDL007C-A 258 nt-0.52□□□□□ -2.49
ERG9P29704 YJL113WYJL113W 4647 nt-0.53□□□□□ -2.49
ERG9P29704 SEC10YLR166C 2616 nt-0.53□□□□□ -2.49
ERG9P29704 YER090C-AYER090C-A 90 nt-0.53□□□□□ -2.49
ERG9P29704 PAU9YBL108C-A 129 nt-0.53□□□□□ -2.49
ERG9P29704 YOR102WYOR102W 351 nt-0.53□□□□□ -2.49
ERG9P29704 snR50snR50 90 nt-0.53□□□□□ -2.49
ERG9P29704 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
ERG9P29704 YNL205CYNL205C 423 nt-0.55□□□□□ -2.5
ERG9P29704 JLP2YMR132C 627 nt-0.56□□□□□ -2.5
ERG9P29704 tD(GUC)QtD(GUC)Q 75 nt-0.57□□□□□ -2.5
ERG9P29704 YNL266WYNL266W 420 nt-0.57□□□□□ -2.5
ERG9P29704 tA(UGC)QtA(UGC)Q 76 nt-0.58□□□□□ -2.5
ERG9P29704 YJL150WYJL150W 303 nt-0.59□□□□□ -2.5
ERG9P29704 YBR178WYBR178W 375 nt-0.6□□□□□ -2.51
ERG9P29704 YNL198CYNL198C 303 nt-0.62□□□□□ -2.51
ERG9P29704 YMR046W-AYMR046W-A 129 nt-0.63□□□□□ -2.51
ERG9P29704 YLR286W-AYLR286W-A 135 nt-0.64□□□□□ -2.51
ERG9P29704 SPG3YDR504C 384 nt-0.68□□□□□ -2.52
ERG9P29704 YDL159C-BYDL159C-B 177 nt-0.69□□□□□ -2.52
ERG9P29704 YBL053WYBL053W 375 nt-0.69□□□□□ -2.52
ERG9P29704 snR67snR67 82 nt-0.74□□□□□ -2.53
ERG9P29704 snR33snR33 183 nt-0.77□□□□□ -2.53
ERG9P29704 YHL009W-BYHL009W-B 5409 nt-0.78□□□□□ -2.53
ERG9P29704 YBR196C-AYBR196C-A 150 nt-0.79□□□□□ -2.54
ERG9P29704 tM(CAU)Q1tM(CAU)Q1 76 nt-0.8□□□□□ -2.54
ERG9P29704 YLR299C-AYLR299C-A 93 nt-0.82□□□□□ -2.54
ERG9P29704 SOM1YEL059C-A 225 nt-0.84□□□□□ -2.54
ERG9P29704 SKI7YOR076C 2244 nt-0.86□□□□□ -2.55
ERG9P29704 tT(UGU)G1tT(UGU)G1 72 nt-0.92□□□□□ -2.56
ERG9P29704 tT(UGU)G2tT(UGU)G2 72 nt-0.92□□□□□ -2.56
ERG9P29704 tT(UGU)PtT(UGU)P 72 nt-0.92□□□□□ -2.56
ERG9P29704 YLR466C-BYLR466C-B 117 nt-0.92□□□□□ -2.56
ERG9P29704 YCR095W-AYCR095W-A 159 nt-0.93□□□□□ -2.56
ERG9P29704 YGR151CYGR151C 336 nt-0.96□□□□□ -2.56
ERG9P29704 snR161snR161 161 nt-0.96□□□□□ -2.56
ERG9P29704 YML054C-AYML054C-A 159 nt-1□□□□□ -2.57
ERG9P29704 YNL338WYNL338W 159 nt-1.03□□□□□ -2.57
ERG9P29704 YNR077CYNR077C 255 nt-1.05□□□□□ -2.58
ERG9P29704 YHR180C-BYHR180C-B 105 nt-1.07□□□□□ -2.58
ERG9P29704 tP(UGG)QtP(UGG)Q 72 nt-1.09□□□□□ -2.58
ERG9P29704 YCL001W-BYCL001W-B 255 nt-1.13□□□□□ -2.59
ERG9P29704 YBR223W-AYBR223W-A 120 nt-1.15□□□□□ -2.59
ERG9P29704 YNL337WYNL337W 255 nt-1.2□□□□□ -2.6
ERG9P29704 YOL083C-AYOL083C-A 141 nt-1.24□□□□□ -2.61
ERG9P29704 YBL071C-BYBL071C-B 99 nt-1.29□□□□□ -2.62
ERG9P29704 YOR376W-AYOR376W-A 156 nt-1.29□□□□□ -2.62
ERG9P29704 CDC65tQ(CUG)M 72 nt-1.3□□□□□ -2.62
ERG9P29704 Q0032Q0032 291 nt-1.31□□□□□ -2.62
ERG9P29704 snR77snR77 88 nt-1.32□□□□□ -2.62
ERG9P29704 YGR240C-AYGR240C-A 201 nt-1.33□□□□□ -2.62
ERG9P29704 YBR109W-AYBR109W-A 225 nt-1.33□□□□□ -2.62
ERG9P29704 RPL41AYDL184C 78 nt-1.34□□□□□ -2.62
ERG9P29704 YGL007C-AYGL007C-A 87 nt-1.36□□□□□ -2.63
ERG9P29704 YOL164W-AYOL164W-A 183 nt-1.36□□□□□ -2.63
ERG9P29704 YBR296C-AYBR296C-A 120 nt-1.36□□□□□ -2.63
ERG9P29704 YAL037C-AYAL037C-A 93 nt-1.38□□□□□ -2.63
ERG9P29704 YKL106C-AYKL106C-A 120 nt-1.38□□□□□ -2.63
ERG9P29704 snR81snR81 201 nt-1.45□□□□□ -2.64
ERG9P29704 tY(GUA)QtY(GUA)Q 84 nt-1.46□□□□□ -2.64
ERG9P29704 YMR315W-AYMR315W-A 108 nt-1.46□□□□□ -2.64
ERG9P29704 snR38snR38 95 nt-1.46□□□□□ -2.64
ERG9P29704 YOR316C-AYOR316C-A 210 nt-1.47□□□□□ -2.64
ERG9P29704 snR47snR47 99 nt-1.47□□□□□ -2.64
ERG9P29704 YBL100W-CYBL100W-C 120 nt-1.5□□□□□ -2.65
ERG9P29704 YLR294CYLR294C 330 nt-1.65□□□□□ -2.67
ERG9P29704 YOR225WYOR225W 330 nt-1.67□□□□□ -2.68
ERG9P29704 YGL041C-BYGL041C-B 183 nt-1.68□□□□□ -2.68
ERG9P29704 YNL103W-AYNL103W-A 90 nt-1.68□□□□□ -2.68
ERG9P29704 tS(GCU)Q1tS(GCU)Q1 86 nt-1.69□□□□□ -2.68
ERG9P29704 snR61snR61 90 nt-1.74□□□□□ -2.69
ERG9P29704 YKL225WYKL225W 348 nt-1.75□□□□□ -2.69
ERG9P29704 YOR309CYOR309C 381 nt-1.76□□□□□ -2.69
ERG9P29704 YNL170WYNL170W 396 nt-1.79□□□□□ -2.7
ERG9P29704 YDR034C-AYDR034C-A 177 nt-1.87□□□□□ -2.71
ERG9P29704 snR6snR6 112 nt-1.95□□□□□ -2.72
ERG9P29704 snR62snR62 100 nt-1.96□□□□□ -2.72
ERG9P29704 ATP8Q0080 147 nt-1.99□□□□□ -2.73
ERG9P29704 YDL114W-AYDL114W-A 114 nt-2.02□□□□□ -2.73
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms