Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RXRBP28702 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
RXRBP28702 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RXRBP28702 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC26.4■■□□□ 1.82
RXRBP28702 AC008040.2-201ENST00000461049 708 ntBASIC26.4■■□□□ 1.82
RXRBP28702 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
RXRBP28702 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RXRBP28702 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RXRBP28702 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26.39■■□□□ 1.82
RXRBP28702 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC26.39■■□□□ 1.82
RXRBP28702 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.39■■□□□ 1.82
RXRBP28702 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
RXRBP28702 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
RXRBP28702 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC26.39■■□□□ 1.82
RXRBP28702 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC26.39■■□□□ 1.82
RXRBP28702 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RXRBP28702 IFNL4P1-201ENST00000607083 540 ntBASIC26.39■■□□□ 1.82
RXRBP28702 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RXRBP28702 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RXRBP28702 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.38■■□□□ 1.81
RXRBP28702 RCC2P6-201ENST00000526625 1557 ntBASIC26.38■■□□□ 1.81
RXRBP28702 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.38■■□□□ 1.81
RXRBP28702 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.38■■□□□ 1.81
RXRBP28702 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.38■■□□□ 1.81
RXRBP28702 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.38■■□□□ 1.81
RXRBP28702 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.38■■□□□ 1.81
RXRBP28702 LINC02084-201ENST00000606069 1096 ntBASIC26.38■■□□□ 1.81
RXRBP28702 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.38■■□□□ 1.81
RXRBP28702 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RXRBP28702 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 LINC01311-201ENST00000565162 1445 ntBASIC26.38■■□□□ 1.81
RXRBP28702 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RXRBP28702 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RXRBP28702 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RXRBP28702 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RXRBP28702 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC26.37■■□□□ 1.81
RXRBP28702 AC079776.4-201ENST00000511039 504 ntBASIC26.37■■□□□ 1.81
RXRBP28702 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.37■■□□□ 1.81
RXRBP28702 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC26.37■■□□□ 1.81
RXRBP28702 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RXRBP28702 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RXRBP28702 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RXRBP28702 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RXRBP28702 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RXRBP28702 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RXRBP28702 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC26.36■■□□□ 1.81
RXRBP28702 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC26.36■■□□□ 1.81
RXRBP28702 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC26.36■■□□□ 1.81
RXRBP28702 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.36■■□□□ 1.81
RXRBP28702 AL353719.1-201ENST00000566847 864 ntBASIC26.36■■□□□ 1.81
RXRBP28702 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC26.36■■□□□ 1.81
RXRBP28702 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RXRBP28702 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RXRBP28702 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RXRBP28702 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RXRBP28702 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RXRBP28702 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.35■■□□□ 1.81
RXRBP28702 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC26.35■■□□□ 1.81
RXRBP28702 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RXRBP28702 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RXRBP28702 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.35■■□□□ 1.81
RXRBP28702 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC26.35■■□□□ 1.81
RXRBP28702 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.35■■□□□ 1.81
RXRBP28702 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
RXRBP28702 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC26.35■■□□□ 1.81
RXRBP28702 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.35■■□□□ 1.81
RXRBP28702 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RXRBP28702 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RXRBP28702 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
RXRBP28702 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.34■■□□□ 1.81
RXRBP28702 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
RXRBP28702 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC26.34■■□□□ 1.81
RXRBP28702 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC26.34■■□□□ 1.81
RXRBP28702 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RXRBP28702 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.34■■□□□ 1.81
RXRBP28702 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RXRBP28702 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.33■■□□□ 1.81
RXRBP28702 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RXRBP28702 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms