Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTPS1P17812 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTPS1P17812 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CTPS1P17812 POU5F1P3-201ENST00000428824 1078 ntBASIC20.06■□□□□ 0.8
CTPS1P17812 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.06■□□□□ 0.8
CTPS1P17812 FAM201B-201ENST00000458407 597 ntBASIC20.06■□□□□ 0.8
CTPS1P17812 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.06■□□□□ 0.8
CTPS1P17812 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.06■□□□□ 0.8
CTPS1P17812 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTPS1P17812 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CTPS1P17812 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTPS1P17812 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTPS1P17812 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CTPS1P17812 AC099778.1-201ENST00000568593 1911 ntBASIC20.06■□□□□ 0.8
CTPS1P17812 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.05■□□□□ 0.8
CTPS1P17812 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CTPS1P17812 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CTPS1P17812 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
CTPS1P17812 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.05■□□□□ 0.8
CTPS1P17812 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.05■□□□□ 0.8
CTPS1P17812 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.05■□□□□ 0.8
CTPS1P17812 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.05■□□□□ 0.8
CTPS1P17812 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.05■□□□□ 0.8
CTPS1P17812 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.05■□□□□ 0.8
CTPS1P17812 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CTPS1P17812 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTPS1P17812 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CTPS1P17812 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.05■□□□□ 0.8
CTPS1P17812 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CTPS1P17812 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 BX119927.1-201ENST00000636596 1552 ntBASIC20.04■□□□□ 0.8
CTPS1P17812 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.04■□□□□ 0.8
CTPS1P17812 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.04■□□□□ 0.8
CTPS1P17812 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 ABHD17AP1-201ENST00000358206 933 ntBASIC20.04■□□□□ 0.8
CTPS1P17812 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.04■□□□□ 0.8
CTPS1P17812 AC006058.3-201ENST00000606217 1069 ntBASIC20.04■□□□□ 0.8
CTPS1P17812 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.04■□□□□ 0.8
CTPS1P17812 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.04■□□□□ 0.8
CTPS1P17812 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 PCDHAC2-203ENST00000615316 3011 ntBASIC20.04■□□□□ 0.8
CTPS1P17812 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.04■□□□□ 0.8
CTPS1P17812 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTPS1P17812 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CTPS1P17812 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CTPS1P17812 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.03■□□□□ 0.8
CTPS1P17812 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CTPS1P17812 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CTPS1P17812 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.03■□□□□ 0.8
CTPS1P17812 RPS2P52-201ENST00000469610 820 ntBASIC20.03■□□□□ 0.8
CTPS1P17812 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.03■□□□□ 0.8
CTPS1P17812 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.03■□□□□ 0.8
CTPS1P17812 AC120498.8-201ENST00000614275 531 ntBASIC20.03■□□□□ 0.8
CTPS1P17812 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CTPS1P17812 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTPS1P17812 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CTPS1P17812 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CTPS1P17812 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 KRT16P6-202ENST00000425692 1426 ntBASIC20.02■□□□□ 0.8
CTPS1P17812 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.02■□□□□ 0.8
CTPS1P17812 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CTPS1P17812 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CTPS1P17812 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.02■□□□□ 0.8
CTPS1P17812 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.02■□□□□ 0.8
CTPS1P17812 AC233263.1-201ENST00000578059 224 ntBASIC20.02■□□□□ 0.8
CTPS1P17812 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.02■□□□□ 0.8
CTPS1P17812 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTPS1P17812 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms