Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBL4AP11441 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.41■□□□□ 0.54
UBL4AP11441 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBL4AP11441 MIPEPP3-201ENST00000412105 444 ntBASIC18.41■□□□□ 0.54
UBL4AP11441 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
UBL4AP11441 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
UBL4AP11441 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBL4AP11441 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
UBL4AP11441 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.4■□□□□ 0.54
UBL4AP11441 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.4■□□□□ 0.54
UBL4AP11441 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.4■□□□□ 0.54
UBL4AP11441 AC090192.1-201ENST00000517740 490 ntBASIC18.4■□□□□ 0.54
UBL4AP11441 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.4■□□□□ 0.54
UBL4AP11441 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.4■□□□□ 0.54
UBL4AP11441 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.4■□□□□ 0.54
UBL4AP11441 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.4■□□□□ 0.54
UBL4AP11441 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UBL4AP11441 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.4■□□□□ 0.54
UBL4AP11441 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.4■□□□□ 0.54
UBL4AP11441 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBL4AP11441 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.4■□□□□ 0.54
UBL4AP11441 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
UBL4AP11441 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
UBL4AP11441 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.39■□□□□ 0.54
UBL4AP11441 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.39■□□□□ 0.54
UBL4AP11441 PTBP1P-201ENST00000554374 1601 ntBASIC18.39■□□□□ 0.53
UBL4AP11441 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
UBL4AP11441 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.39■□□□□ 0.53
UBL4AP11441 GUSBP6-202ENST00000438529 1198 ntBASIC18.39■□□□□ 0.53
UBL4AP11441 TSPY6P-201ENST00000448518 926 ntBASIC18.39■□□□□ 0.53
UBL4AP11441 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.39■□□□□ 0.53
UBL4AP11441 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.39■□□□□ 0.53
UBL4AP11441 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.39■□□□□ 0.53
UBL4AP11441 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
UBL4AP11441 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UBL4AP11441 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL4AP11441 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UBL4AP11441 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL4AP11441 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL4AP11441 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL4AP11441 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL4AP11441 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
UBL4AP11441 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UBL4AP11441 BX119927.1-201ENST00000636596 1552 ntBASIC18.38■□□□□ 0.53
UBL4AP11441 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBL4AP11441 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL4AP11441 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBL4AP11441 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL4AP11441 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.37■□□□□ 0.53
UBL4AP11441 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
UBL4AP11441 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 AC112907.3-201ENST00000577781 2400 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms