Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLUP10909 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CLUP10909 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLUP10909 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CLUP10909 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CLUP10909 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.95■□□□□ 0.46
CLUP10909 TMEM179-206ENST00000616017 1645 ntBASIC17.95■□□□□ 0.46
CLUP10909 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.95■□□□□ 0.46
CLUP10909 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.95■□□□□ 0.46
CLUP10909 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLUP10909 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.95■□□□□ 0.46
CLUP10909 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 AL356652.1-201ENST00000615962 565 ntBASIC17.95■□□□□ 0.46
CLUP10909 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
CLUP10909 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLUP10909 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.95■□□□□ 0.46
CLUP10909 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
CLUP10909 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLUP10909 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLUP10909 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.94■□□□□ 0.46
CLUP10909 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.94■□□□□ 0.46
CLUP10909 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.94■□□□□ 0.46
CLUP10909 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.94■□□□□ 0.46
CLUP10909 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLUP10909 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.94■□□□□ 0.46
CLUP10909 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.94■□□□□ 0.46
CLUP10909 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CLUP10909 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.94■□□□□ 0.46
CLUP10909 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLUP10909 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.94■□□□□ 0.46
CLUP10909 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CLUP10909 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.94■□□□□ 0.46
CLUP10909 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLUP10909 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLUP10909 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLUP10909 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.93■□□□□ 0.46
CLUP10909 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLUP10909 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.93■□□□□ 0.46
CLUP10909 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 AC087633.2-202ENST00000565166 1439 ntBASIC17.93■□□□□ 0.46
CLUP10909 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.93■□□□□ 0.46
CLUP10909 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.93■□□□□ 0.46
CLUP10909 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.93■□□□□ 0.46
CLUP10909 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.93■□□□□ 0.46
CLUP10909 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLUP10909 AC098818.2-201ENST00000564925 2320 ntBASIC17.93■□□□□ 0.46
CLUP10909 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.93■□□□□ 0.46
CLUP10909 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLUP10909 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
CLUP10909 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CLUP10909 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLUP10909 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.92■□□□□ 0.46
CLUP10909 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLUP10909 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLUP10909 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.92■□□□□ 0.46
CLUP10909 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.92■□□□□ 0.46
CLUP10909 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLUP10909 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.92■□□□□ 0.46
CLUP10909 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CLUP10909 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLUP10909 AC097381.1-201ENST00000429019 1296 ntBASIC17.92■□□□□ 0.46
CLUP10909 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLUP10909 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.92■□□□□ 0.46
CLUP10909 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.92■□□□□ 0.46
CLUP10909 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.92■□□□□ 0.46
CLUP10909 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms