Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RARAP10276 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RARAP10276 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RARAP10276 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RARAP10276 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RARAP10276 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
RARAP10276 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RARAP10276 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.92■□□□□ 0.94
RARAP10276 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RARAP10276 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RARAP10276 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 MIR663A-201ENST00000385250 93 ntBASIC20.92■□□□□ 0.94
RARAP10276 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.92■□□□□ 0.94
RARAP10276 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 TMEM179-206ENST00000616017 1645 ntBASIC20.92■□□□□ 0.94
RARAP10276 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.92■□□□□ 0.94
RARAP10276 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RARAP10276 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RARAP10276 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 AL589743.5-201ENST00000616611 1050 ntBASIC20.91■□□□□ 0.94
RARAP10276 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.91■□□□□ 0.94
RARAP10276 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RARAP10276 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.9■□□□□ 0.94
RARAP10276 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
RARAP10276 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RARAP10276 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.9■□□□□ 0.94
RARAP10276 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RARAP10276 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.9■□□□□ 0.94
RARAP10276 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RARAP10276 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.9■□□□□ 0.94
RARAP10276 AC105036.2-201ENST00000569468 176 ntBASIC20.9■□□□□ 0.94
RARAP10276 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RARAP10276 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.9■□□□□ 0.94
RARAP10276 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.9■□□□□ 0.94
RARAP10276 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RARAP10276 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RARAP10276 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RARAP10276 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RARAP10276 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.89■□□□□ 0.94
RARAP10276 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RARAP10276 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.89■□□□□ 0.94
RARAP10276 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RARAP10276 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RARAP10276 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.89■□□□□ 0.93
RARAP10276 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RARAP10276 AF201337.1-201ENST00000520239 748 ntBASIC20.89■□□□□ 0.93
RARAP10276 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.89■□□□□ 0.93
RARAP10276 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.89■□□□□ 0.93
RARAP10276 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
RARAP10276 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RARAP10276 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RARAP10276 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
RARAP10276 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RARAP10276 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RARAP10276 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RARAP10276 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.88■□□□□ 0.93
RARAP10276 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.88■□□□□ 0.93
RARAP10276 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.88■□□□□ 0.93
RARAP10276 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.88■□□□□ 0.93
RARAP10276 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RARAP10276 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.88■□□□□ 0.93
RARAP10276 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.88■□□□□ 0.93
RARAP10276 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms