Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KRT16P5-201ENST00000455284 522 ntBASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 REXO1L12P-201ENST00000622156 912 ntBASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 AC113410.3-201ENST00000623366 203 ntBASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAB40ALP0C0E4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 NBPF21P-201ENST00000425093 1451 ntBASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40ALP0C0E4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 AL353807.1-201ENST00000427475 662 ntBASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 AL031963.3-201ENST00000606441 850 ntBASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 KRT8P20-201ENST00000423953 1409 ntBASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40ALP0C0E4 PTBP1P-201ENST00000554374 1601 ntBASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms