Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
THBS1P07996 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
THBS1P07996 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
THBS1P07996 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
THBS1P07996 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
THBS1P07996 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
THBS1P07996 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
THBS1P07996 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
THBS1P07996 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
THBS1P07996 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 AP001271.2-201ENST00000624018 1556 ntBASIC18.34■□□□□ 0.53
THBS1P07996 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.34■□□□□ 0.53
THBS1P07996 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.34■□□□□ 0.53
THBS1P07996 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 LSM12P1-201ENST00000411836 588 ntBASIC18.34■□□□□ 0.53
THBS1P07996 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.34■□□□□ 0.53
THBS1P07996 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.34■□□□□ 0.53
THBS1P07996 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THBS1P07996 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
THBS1P07996 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.33■□□□□ 0.53
THBS1P07996 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.33■□□□□ 0.53
THBS1P07996 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.33■□□□□ 0.53
THBS1P07996 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.33■□□□□ 0.52
THBS1P07996 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
THBS1P07996 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
THBS1P07996 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.33■□□□□ 0.52
THBS1P07996 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.33■□□□□ 0.52
THBS1P07996 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
THBS1P07996 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.33■□□□□ 0.52
THBS1P07996 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.33■□□□□ 0.52
THBS1P07996 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.33■□□□□ 0.52
THBS1P07996 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.33■□□□□ 0.52
THBS1P07996 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
THBS1P07996 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
THBS1P07996 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.33■□□□□ 0.52
THBS1P07996 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
THBS1P07996 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
THBS1P07996 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.32■□□□□ 0.52
THBS1P07996 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
THBS1P07996 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
THBS1P07996 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
THBS1P07996 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.32■□□□□ 0.52
THBS1P07996 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.32■□□□□ 0.52
THBS1P07996 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.32■□□□□ 0.52
THBS1P07996 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
THBS1P07996 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
THBS1P07996 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 MKRN4P-201ENST00000444706 1521 ntBASIC18.32■□□□□ 0.52
THBS1P07996 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
THBS1P07996 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.31■□□□□ 0.52
THBS1P07996 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THBS1P07996 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.31■□□□□ 0.52
THBS1P07996 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
THBS1P07996 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THBS1P07996 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
THBS1P07996 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
THBS1P07996 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THBS1P07996 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THBS1P07996 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.31■□□□□ 0.52
THBS1P07996 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
THBS1P07996 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.31■□□□□ 0.52
THBS1P07996 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.31■□□□□ 0.52
THBS1P07996 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.31■□□□□ 0.52
THBS1P07996 AF201337.1-201ENST00000520239 748 ntBASIC18.31■□□□□ 0.52
THBS1P07996 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.31■□□□□ 0.52
THBS1P07996 AL050303.2-201ENST00000619798 666 ntBASIC18.31■□□□□ 0.52
THBS1P07996 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THBS1P07996 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms