Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 AL031133.1-201ENST00000406807 723 ntBASIC26.44■■□□□ 1.82
COL5A2P05997 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.44■■□□□ 1.82
COL5A2P05997 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 AC233723.2-201ENST00000623798 2106 ntBASIC26.44■■□□□ 1.82
COL5A2P05997 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL5A2P05997 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
COL5A2P05997 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.43■■□□□ 1.82
COL5A2P05997 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL5A2P05997 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL5A2P05997 BX664615.1-201ENST00000443558 458 ntBASIC26.43■■□□□ 1.82
COL5A2P05997 AC091390.4-202ENST00000476426 537 ntBASIC26.43■■□□□ 1.82
COL5A2P05997 KRT18P16-201ENST00000510337 1294 ntBASIC26.43■■□□□ 1.82
COL5A2P05997 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL5A2P05997 AL138966.2-201ENST00000621997 464 ntBASIC26.43■■□□□ 1.82
COL5A2P05997 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL5A2P05997 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL5A2P05997 COPE-203ENST00000351079 907 ntTSL 2 BASIC26.42■■□□□ 1.82
COL5A2P05997 HMGA1P5-201ENST00000412453 271 ntBASIC26.42■■□□□ 1.82
COL5A2P05997 SAPCD2P2-201ENST00000431719 1174 ntBASIC26.42■■□□□ 1.82
COL5A2P05997 TOLLIP-AS1-201ENST00000530897 939 ntBASIC26.42■■□□□ 1.82
COL5A2P05997 LINC01238-205ENST00000567549 1107 ntBASIC26.42■■□□□ 1.82
COL5A2P05997 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.42■■□□□ 1.82
COL5A2P05997 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
COL5A2P05997 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
COL5A2P05997 AC116351.2-201ENST00000606540 1585 ntBASIC26.42■■□□□ 1.82
COL5A2P05997 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.42■■□□□ 1.82
COL5A2P05997 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.42■■□□□ 1.82
COL5A2P05997 KRT8P17-201ENST00000453110 1448 ntBASIC26.42■■□□□ 1.82
COL5A2P05997 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
COL5A2P05997 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 AL121894.2-201ENST00000602977 491 ntBASIC26.42■■□□□ 1.82
COL5A2P05997 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
COL5A2P05997 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL5A2P05997 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC26.41■■□□□ 1.82
COL5A2P05997 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.41■■□□□ 1.82
COL5A2P05997 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
COL5A2P05997 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL5A2P05997 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
COL5A2P05997 RCC2P6-201ENST00000526625 1557 ntBASIC26.4■■□□□ 1.82
COL5A2P05997 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
COL5A2P05997 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC26.4■■□□□ 1.82
COL5A2P05997 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
COL5A2P05997 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC26.4■■□□□ 1.82
COL5A2P05997 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC26.4■■□□□ 1.82
COL5A2P05997 Z98882.1-201ENST00000622160 2253 ntBASIC26.4■■□□□ 1.82
COL5A2P05997 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL5A2P05997 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL5A2P05997 AC096733.2-201ENST00000609937 1394 ntBASIC26.39■■□□□ 1.82
COL5A2P05997 AL121603.2-201ENST00000557373 2117 ntBASIC26.39■■□□□ 1.82
COL5A2P05997 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.39■■□□□ 1.82
COL5A2P05997 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL5A2P05997 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.39■■□□□ 1.82
COL5A2P05997 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL5A2P05997 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
COL5A2P05997 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26.39■■□□□ 1.82
COL5A2P05997 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC26.39■■□□□ 1.82
COL5A2P05997 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
COL5A2P05997 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC26.39■■□□□ 1.82
COL5A2P05997 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL5A2P05997 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.39■■□□□ 1.81
COL5A2P05997 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.39■■□□□ 1.81
COL5A2P05997 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.39■■□□□ 1.81
COL5A2P05997 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.81
COL5A2P05997 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL5A2P05997 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC26.39■■□□□ 1.81
COL5A2P05997 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
COL5A2P05997 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL5A2P05997 YBX1P2-201ENST00000489612 999 ntBASIC26.38■■□□□ 1.81
COL5A2P05997 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC26.38■■□□□ 1.81
COL5A2P05997 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL5A2P05997 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC26.38■■□□□ 1.81
COL5A2P05997 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.37■■□□□ 1.81
COL5A2P05997 TFP1-202ENST00000475455 1573 ntBASIC26.37■■□□□ 1.81
COL5A2P05997 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.37■■□□□ 1.81
COL5A2P05997 COPS8-203ENST00000409334 794 ntTSL 5 BASIC26.37■■□□□ 1.81
COL5A2P05997 AC009947.2-201ENST00000444014 672 ntBASIC26.37■■□□□ 1.81
COL5A2P05997 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
COL5A2P05997 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC26.37■■□□□ 1.81
COL5A2P05997 AC139887.4-201ENST00000607877 719 ntBASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms