Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DUX4L1-201ENST00000627662 1275 ntBASIC15.16■□□□□ 0.02
TCRAP04437 DUX4L8-201ENST00000629013 1275 ntBASIC15.16■□□□□ 0.02
TCRAP04437 DUX4L3-201ENST00000630187 1275 ntBASIC15.16■□□□□ 0.02
TCRAP04437 DUX4L7-201ENST00000630678 1275 ntBASIC15.16■□□□□ 0.02
TCRAP04437 DUX4L5-201ENST00000630834 1275 ntBASIC15.16■□□□□ 0.02
TCRAP04437 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.16■□□□□ 0.02
TCRAP04437 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TCRAP04437 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TCRAP04437 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRAP04437 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
TCRAP04437 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TCRAP04437 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.15■□□□□ 0.02
TCRAP04437 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 AC091305.1-201ENST00000479476 895 ntBASIC15.15■□□□□ 0.02
TCRAP04437 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.15■□□□□ 0.02
TCRAP04437 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 AC106739.1-201ENST00000617035 715 ntBASIC15.15■□□□□ 0.02
TCRAP04437 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TCRAP04437 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TCRAP04437 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRAP04437 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRAP04437 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRAP04437 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TCRAP04437 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRAP04437 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TCRAP04437 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 AC096631.2-201ENST00000436136 790 ntBASIC15.14■□□□□ 0.01
TCRAP04437 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.14■□□□□ 0.01
TCRAP04437 AC105265.2-201ENST00000467189 838 ntBASIC15.14■□□□□ 0.01
TCRAP04437 AF213884.3-201ENST00000563833 479 ntBASIC15.14■□□□□ 0.01
TCRAP04437 AC243732.1-201ENST00000612648 864 ntBASIC15.14■□□□□ 0.01
TCRAP04437 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRAP04437 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 AC009237.14-201ENST00000609975 1594 ntBASIC15.14■□□□□ 0.01
TCRAP04437 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TCRAP04437 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TCRAP04437 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TCRAP04437 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TCRAP04437 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRAP04437 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRAP04437 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRAP04437 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRAP04437 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.13■□□□□ 0.01
TCRAP04437 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TCRAP04437 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TCRAP04437 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TCRAP04437 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRAP04437 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRAP04437 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRAP04437 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TCRAP04437 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRAP04437 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRAP04437 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRAP04437 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms