Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA8O94911 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA8O94911 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC31.28■■■□□ 2.6
ABCA8O94911 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC31.28■■■□□ 2.6
ABCA8O94911 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.27■■■□□ 2.6
ABCA8O94911 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC31.27■■■□□ 2.6
ABCA8O94911 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
ABCA8O94911 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
ABCA8O94911 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA8O94911 COPS8-203ENST00000409334 794 ntTSL 5 BASIC31.26■■■□□ 2.6
ABCA8O94911 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
ABCA8O94911 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
ABCA8O94911 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
ABCA8O94911 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC31.26■■■□□ 2.59
ABCA8O94911 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ABCA8O94911 YBX1P2-201ENST00000489612 999 ntBASIC31.26■■■□□ 2.59
ABCA8O94911 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC31.25■■■□□ 2.59
ABCA8O94911 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC31.25■■■□□ 2.59
ABCA8O94911 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC31.25■■■□□ 2.59
ABCA8O94911 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 LINC01238-205ENST00000567549 1107 ntBASIC31.25■■■□□ 2.59
ABCA8O94911 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC31.25■■■□□ 2.59
ABCA8O94911 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA8O94911 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
ABCA8O94911 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
ABCA8O94911 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC31.24■■■□□ 2.59
ABCA8O94911 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC31.24■■■□□ 2.59
ABCA8O94911 COPE-203ENST00000351079 907 ntTSL 2 BASIC31.24■■■□□ 2.59
ABCA8O94911 AC009947.2-201ENST00000444014 672 ntBASIC31.24■■■□□ 2.59
ABCA8O94911 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.24■■■□□ 2.59
ABCA8O94911 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC31.24■■■□□ 2.59
ABCA8O94911 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
ABCA8O94911 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
ABCA8O94911 STK25-204ENST00000405585 1643 ntTSL 2 BASIC31.24■■■□□ 2.59
ABCA8O94911 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ABCA8O94911 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ABCA8O94911 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC31.23■■■□□ 2.59
ABCA8O94911 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA8O94911 KRT8P17-201ENST00000453110 1448 ntBASIC31.23■■■□□ 2.59
ABCA8O94911 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA8O94911 BX664615.1-201ENST00000443558 458 ntBASIC31.23■■■□□ 2.59
ABCA8O94911 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA8O94911 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA8O94911 TFP1-202ENST00000475455 1573 ntBASIC31.23■■■□□ 2.59
ABCA8O94911 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC31.23■■■□□ 2.59
ABCA8O94911 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA8O94911 DUSP5P1-201ENST00000441325 1139 ntBASIC31.22■■■□□ 2.59
ABCA8O94911 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC31.22■■■□□ 2.59
ABCA8O94911 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC31.22■■■□□ 2.59
ABCA8O94911 AP000692.2-201ENST00000608391 879 ntBASIC31.22■■■□□ 2.59
ABCA8O94911 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA8O94911 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
ABCA8O94911 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA8O94911 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA8O94911 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA8O94911 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA8O94911 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA8O94911 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC31.22■■■□□ 2.59
ABCA8O94911 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA8O94911 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
ABCA8O94911 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC31.21■■■□□ 2.59
ABCA8O94911 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA8O94911 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
ABCA8O94911 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC31.21■■■□□ 2.59
ABCA8O94911 AP000550.4-202ENST00000639755 178 ntBASIC31.21■■■□□ 2.59
ABCA8O94911 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA8O94911 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA8O94911 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC31.2■■■□□ 2.59
ABCA8O94911 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
ABCA8O94911 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA8O94911 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC31.2■■■□□ 2.59
ABCA8O94911 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
ABCA8O94911 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC31.19■■■□□ 2.58
ABCA8O94911 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC31.19■■■□□ 2.58
ABCA8O94911 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA8O94911 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
ABCA8O94911 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA8O94911 Z98882.1-201ENST00000622160 2253 ntBASIC31.19■■■□□ 2.58
ABCA8O94911 HIST1H2APS4-201ENST00000362070 348 ntBASIC31.19■■■□□ 2.58
ABCA8O94911 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC31.19■■■□□ 2.58
ABCA8O94911 AC139887.4-201ENST00000607877 719 ntBASIC31.19■■■□□ 2.58
ABCA8O94911 AL121603.2-201ENST00000557373 2117 ntBASIC31.19■■■□□ 2.58
ABCA8O94911 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA8O94911 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA8O94911 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.18■■■□□ 2.58
ABCA8O94911 BET1L-202ENST00000332865 533 ntTSL 5 BASIC31.18■■■□□ 2.58
ABCA8O94911 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms