Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.16■□□□□ 0.82
USP1O94782 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
USP1O94782 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.15■□□□□ 0.82
USP1O94782 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.15■□□□□ 0.82
USP1O94782 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.15■□□□□ 0.82
USP1O94782 CYP2T1P-201ENST00000432607 1285 ntBASIC20.15■□□□□ 0.82
USP1O94782 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 AC069236.1-201ENST00000604339 616 ntBASIC20.15■□□□□ 0.82
USP1O94782 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
USP1O94782 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
USP1O94782 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.15■□□□□ 0.82
USP1O94782 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP1O94782 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP1O94782 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP1O94782 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP1O94782 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP1O94782 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
USP1O94782 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
USP1O94782 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.14■□□□□ 0.81
USP1O94782 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 KRT18P68-201ENST00000392293 1000 ntBASIC20.14■□□□□ 0.81
USP1O94782 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.14■□□□□ 0.81
USP1O94782 AC090192.1-201ENST00000517740 490 ntBASIC20.14■□□□□ 0.81
USP1O94782 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.14■□□□□ 0.81
USP1O94782 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP1O94782 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.14■□□□□ 0.81
USP1O94782 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.13■□□□□ 0.81
USP1O94782 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
USP1O94782 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.13■□□□□ 0.81
USP1O94782 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
USP1O94782 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.13■□□□□ 0.81
USP1O94782 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP1O94782 AC004911.1-201ENST00000416316 871 ntBASIC20.13■□□□□ 0.81
USP1O94782 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.13■□□□□ 0.81
USP1O94782 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.13■□□□□ 0.81
USP1O94782 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.13■□□□□ 0.81
USP1O94782 CYP2T3P-201ENST00000601990 817 ntBASIC20.13■□□□□ 0.81
USP1O94782 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.13■□□□□ 0.81
USP1O94782 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
USP1O94782 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USP1O94782 KRT8P17-201ENST00000453110 1448 ntBASIC20.12■□□□□ 0.81
USP1O94782 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.12■□□□□ 0.81
USP1O94782 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
USP1O94782 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.12■□□□□ 0.81
USP1O94782 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.12■□□□□ 0.81
USP1O94782 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
USP1O94782 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.12■□□□□ 0.81
USP1O94782 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP1O94782 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
USP1O94782 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.11■□□□□ 0.81
USP1O94782 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.11■□□□□ 0.81
USP1O94782 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.11■□□□□ 0.81
USP1O94782 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms