Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKL5O76039 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
CDKL5O76039 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKL5O76039 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDKL5O76039 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.19■■□□□ 1.3
CDKL5O76039 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDKL5O76039 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKL5O76039 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.19■■□□□ 1.3
CDKL5O76039 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKL5O76039 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.19■■□□□ 1.3
CDKL5O76039 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKL5O76039 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKL5O76039 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.18■■□□□ 1.3
CDKL5O76039 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CDKL5O76039 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CDKL5O76039 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.18■■□□□ 1.3
CDKL5O76039 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.18■■□□□ 1.3
CDKL5O76039 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
CDKL5O76039 AL109923.1-201ENST00000618799 583 ntBASIC23.18■■□□□ 1.3
CDKL5O76039 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKL5O76039 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.17■■□□□ 1.3
CDKL5O76039 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CDKL5O76039 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.17■■□□□ 1.3
CDKL5O76039 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.17■■□□□ 1.3
CDKL5O76039 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.17■■□□□ 1.3
CDKL5O76039 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.17■■□□□ 1.3
CDKL5O76039 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CDKL5O76039 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKL5O76039 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.17■■□□□ 1.3
CDKL5O76039 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CDKL5O76039 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.16■■□□□ 1.3
CDKL5O76039 AL390719.1-204ENST00000412397 1219 ntBASIC23.16■■□□□ 1.3
CDKL5O76039 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.16■■□□□ 1.3
CDKL5O76039 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.16■■□□□ 1.3
CDKL5O76039 AC097658.1-201ENST00000475555 843 ntBASIC23.16■■□□□ 1.3
CDKL5O76039 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.16■■□□□ 1.3
CDKL5O76039 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.16■■□□□ 1.3
CDKL5O76039 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.16■■□□□ 1.3
CDKL5O76039 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.16■■□□□ 1.3
CDKL5O76039 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CDKL5O76039 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.16■■□□□ 1.3
CDKL5O76039 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKL5O76039 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CDKL5O76039 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.15■■□□□ 1.3
CDKL5O76039 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CDKL5O76039 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.15■■□□□ 1.3
CDKL5O76039 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.15■■□□□ 1.3
CDKL5O76039 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKL5O76039 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.15■■□□□ 1.3
CDKL5O76039 AFG3L1P-217ENST00000557444 2447 ntBASIC23.15■■□□□ 1.3
CDKL5O76039 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.15■■□□□ 1.3
CDKL5O76039 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.15■■□□□ 1.3
CDKL5O76039 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CDKL5O76039 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKL5O76039 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKL5O76039 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKL5O76039 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDKL5O76039 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CDKL5O76039 AC009237.14-201ENST00000609975 1594 ntBASIC23.14■■□□□ 1.3
CDKL5O76039 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDKL5O76039 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.14■■□□□ 1.3
CDKL5O76039 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
CDKL5O76039 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDKL5O76039 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.14■■□□□ 1.3
CDKL5O76039 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.14■■□□□ 1.3
CDKL5O76039 AC073210.2-201ENST00000430369 194 ntBASIC23.14■■□□□ 1.29
CDKL5O76039 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.14■■□□□ 1.29
CDKL5O76039 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.14■■□□□ 1.29
CDKL5O76039 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.14■■□□□ 1.29
CDKL5O76039 MYC-209ENST00000641252 345 ntBASIC23.14■■□□□ 1.29
CDKL5O76039 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms