Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLHL41O60662 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLHL41O60662 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KLHL41O60662 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLHL41O60662 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KLHL41O60662 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLHL41O60662 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.73■□□□□ 0.75
KLHL41O60662 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLHL41O60662 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLHL41O60662 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KLHL41O60662 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.73■□□□□ 0.75
KLHL41O60662 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.72■□□□□ 0.75
KLHL41O60662 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.72■□□□□ 0.75
KLHL41O60662 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL41O60662 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL41O60662 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
KLHL41O60662 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL41O60662 AF201337.1-201ENST00000520239 748 ntBASIC19.72■□□□□ 0.75
KLHL41O60662 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL41O60662 AC010536.3-201ENST00000620306 533 ntBASIC19.72■□□□□ 0.75
KLHL41O60662 AC013268.1-206ENST00000638368 961 ntBASIC19.72■□□□□ 0.75
KLHL41O60662 AC112229.1-201ENST00000639295 961 ntBASIC19.72■□□□□ 0.75
KLHL41O60662 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
KLHL41O60662 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
KLHL41O60662 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
KLHL41O60662 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.72■□□□□ 0.75
KLHL41O60662 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.72■□□□□ 0.75
KLHL41O60662 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.72■□□□□ 0.75
KLHL41O60662 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL41O60662 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL41O60662 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL41O60662 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
KLHL41O60662 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KLHL41O60662 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KLHL41O60662 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.71■□□□□ 0.75
KLHL41O60662 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHL41O60662 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KLHL41O60662 TMEM191A-211ENST00000637163 1067 ntBASIC19.71■□□□□ 0.75
KLHL41O60662 AC133041.1-202ENST00000642053 222 ntBASIC19.71■□□□□ 0.75
KLHL41O60662 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
KLHL41O60662 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
KLHL41O60662 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL41O60662 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL41O60662 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 AP000974.1-201ENST00000623909 2387 ntBASIC19.7■□□□□ 0.74
KLHL41O60662 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KLHL41O60662 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 AC073210.2-201ENST00000430369 194 ntBASIC19.7■□□□□ 0.74
KLHL41O60662 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL41O60662 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.7■□□□□ 0.74
KLHL41O60662 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KLHL41O60662 SLC7A5P2-201ENST00000553010 536 ntBASIC19.7■□□□□ 0.74
KLHL41O60662 AC008175.2-201ENST00000612840 297 ntBASIC19.7■□□□□ 0.74
KLHL41O60662 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL41O60662 MIR2861-201ENST00000636310 90 ntBASIC19.7■□□□□ 0.74
KLHL41O60662 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KLHL41O60662 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KLHL41O60662 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 BX323043.1-201ENST00000641006 1765 ntBASIC19.7■□□□□ 0.74
KLHL41O60662 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL41O60662 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KLHL41O60662 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL41O60662 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
KLHL41O60662 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL41O60662 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
KLHL41O60662 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
KLHL41O60662 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL41O60662 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL41O60662 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL41O60662 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
KLHL41O60662 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
KLHL41O60662 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL41O60662 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL41O60662 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL41O60662 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.68■□□□□ 0.74
KLHL41O60662 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms