Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 AC097658.1-201ENST00000475555 843 ntBASIC17.79■□□□□ 0.44
TRAF3IP2O43734 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 AC133041.1-202ENST00000642053 222 ntBASIC17.79■□□□□ 0.44
TRAF3IP2O43734 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 AL355802.2-201ENST00000402069 882 ntBASIC17.78■□□□□ 0.44
TRAF3IP2O43734 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 KRT16P6-202ENST00000425692 1426 ntBASIC17.78■□□□□ 0.44
TRAF3IP2O43734 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP2O43734 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP2O43734 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP2O43734 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP2O43734 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP2O43734 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRAF3IP2O43734 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TRAF3IP2O43734 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP2O43734 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAF3IP2O43734 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 SLC25A24-204ENST00000569674 2357 ntBASIC17.76■□□□□ 0.43
TRAF3IP2O43734 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP2O43734 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 AC005829.2-201ENST00000571422 1056 ntBASIC17.75■□□□□ 0.43
TRAF3IP2O43734 HLA-B-256ENST00000639848 1089 ntBASIC17.75■□□□□ 0.43
TRAF3IP2O43734 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms