Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.27■□□□□ 0.84
KDELR3O43731 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.27■□□□□ 0.84
KDELR3O43731 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.27■□□□□ 0.84
KDELR3O43731 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.27■□□□□ 0.84
KDELR3O43731 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KDELR3O43731 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.26■□□□□ 0.83
KDELR3O43731 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
KDELR3O43731 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.26■□□□□ 0.83
KDELR3O43731 AL391422.3-201ENST00000603791 2761 ntBASIC20.26■□□□□ 0.83
KDELR3O43731 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.26■□□□□ 0.83
KDELR3O43731 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.26■□□□□ 0.83
KDELR3O43731 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.26■□□□□ 0.83
KDELR3O43731 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KDELR3O43731 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.26■□□□□ 0.83
KDELR3O43731 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.26■□□□□ 0.83
KDELR3O43731 MTDHP1-201ENST00000605323 784 ntBASIC20.26■□□□□ 0.83
KDELR3O43731 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
KDELR3O43731 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.26■□□□□ 0.83
KDELR3O43731 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
KDELR3O43731 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDELR3O43731 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.26■□□□□ 0.83
KDELR3O43731 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.25■□□□□ 0.83
KDELR3O43731 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 PRORSD1P-201ENST00000295112 541 ntBASIC20.25■□□□□ 0.83
KDELR3O43731 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.25■□□□□ 0.83
KDELR3O43731 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.25■□□□□ 0.83
KDELR3O43731 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.25■□□□□ 0.83
KDELR3O43731 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.25■□□□□ 0.83
KDELR3O43731 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.25■□□□□ 0.83
KDELR3O43731 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.25■□□□□ 0.83
KDELR3O43731 RN7SL471P-201ENST00000580476 299 ntBASIC20.25■□□□□ 0.83
KDELR3O43731 AL121906.2-201ENST00000621597 723 ntBASIC20.25■□□□□ 0.83
KDELR3O43731 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDELR3O43731 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 PHGDH-210ENST00000641115 1638 ntBASIC20.24■□□□□ 0.83
KDELR3O43731 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.24■□□□□ 0.83
KDELR3O43731 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.24■□□□□ 0.83
KDELR3O43731 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.24■□□□□ 0.83
KDELR3O43731 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.24■□□□□ 0.83
KDELR3O43731 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.24■□□□□ 0.83
KDELR3O43731 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KDELR3O43731 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KDELR3O43731 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KDELR3O43731 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KDELR3O43731 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDELR3O43731 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.23■□□□□ 0.83
KDELR3O43731 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 AC116351.2-201ENST00000606540 1585 ntBASIC20.23■□□□□ 0.83
KDELR3O43731 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
KDELR3O43731 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KDELR3O43731 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDELR3O43731 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.23■□□□□ 0.83
KDELR3O43731 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.23■□□□□ 0.83
KDELR3O43731 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDELR3O43731 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms