Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF13O43567 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF13O43567 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF13O43567 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF13O43567 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
RNF13O43567 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
RNF13O43567 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF13O43567 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF13O43567 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF13O43567 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF13O43567 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 BX323043.1-201ENST00000641006 1765 ntBASIC18.12■□□□□ 0.49
RNF13O43567 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF13O43567 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF13O43567 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF13O43567 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF13O43567 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF13O43567 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF13O43567 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF13O43567 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF13O43567 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF13O43567 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF13O43567 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF13O43567 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF13O43567 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RNF13O43567 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF13O43567 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF13O43567 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF13O43567 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RNF13O43567 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF13O43567 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF13O43567 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF13O43567 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF13O43567 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF13O43567 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
RNF13O43567 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RNF13O43567 IKBKGP1-201ENST00000612193 1073 ntBASIC18.1■□□□□ 0.49
RNF13O43567 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF13O43567 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF13O43567 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 AC138932.1-201ENST00000534164 6830 ntBASIC18.1■□□□□ 0.49
RNF13O43567 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RNF13O43567 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF13O43567 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF13O43567 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF13O43567 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF13O43567 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
RNF13O43567 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF13O43567 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
RNF13O43567 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF13O43567 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF13O43567 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF13O43567 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF13O43567 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF13O43567 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF13O43567 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF13O43567 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF13O43567 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF13O43567 AC004911.1-201ENST00000416316 871 ntBASIC18.09■□□□□ 0.49
RNF13O43567 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF13O43567 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF13O43567 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF13O43567 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF13O43567 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF13O43567 AL137784.2-201ENST00000607332 1000 ntBASIC18.09■□□□□ 0.49
RNF13O43567 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF13O43567 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RNF13O43567 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF13O43567 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF13O43567 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms