Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PHGDHO43175 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PHGDHO43175 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PHGDHO43175 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.82■□□□□ 0.76
PHGDHO43175 CYP2T1P-201ENST00000432607 1285 ntBASIC19.82■□□□□ 0.76
PHGDHO43175 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.82■□□□□ 0.76
PHGDHO43175 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.81■□□□□ 0.76
PHGDHO43175 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.81■□□□□ 0.76
PHGDHO43175 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.81■□□□□ 0.76
PHGDHO43175 AC100791.3-201ENST00000617619 330 ntBASIC19.81■□□□□ 0.76
PHGDHO43175 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 AC105020.6-201ENST00000621523 1217 ntBASIC19.81■□□□□ 0.76
PHGDHO43175 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHGDHO43175 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
PHGDHO43175 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.81■□□□□ 0.76
PHGDHO43175 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.8■□□□□ 0.76
PHGDHO43175 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.8■□□□□ 0.76
PHGDHO43175 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PHGDHO43175 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHGDHO43175 AL355472.2-201ENST00000422958 438 ntBASIC19.8■□□□□ 0.76
PHGDHO43175 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.8■□□□□ 0.76
PHGDHO43175 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.8■□□□□ 0.76
PHGDHO43175 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.8■□□□□ 0.76
PHGDHO43175 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.8■□□□□ 0.76
PHGDHO43175 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.8■□□□□ 0.76
PHGDHO43175 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PHGDHO43175 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.8■□□□□ 0.76
PHGDHO43175 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHGDHO43175 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PHGDHO43175 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHGDHO43175 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.8■□□□□ 0.76
PHGDHO43175 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.79■□□□□ 0.76
PHGDHO43175 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PHGDHO43175 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PHGDHO43175 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.79■□□□□ 0.76
PHGDHO43175 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHGDHO43175 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PHGDHO43175 KRT18P68-201ENST00000392293 1000 ntBASIC19.79■□□□□ 0.76
PHGDHO43175 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.79■□□□□ 0.76
PHGDHO43175 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.79■□□□□ 0.76
PHGDHO43175 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.79■□□□□ 0.76
PHGDHO43175 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.79■□□□□ 0.76
PHGDHO43175 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.79■□□□□ 0.76
PHGDHO43175 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHGDHO43175 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.79■□□□□ 0.76
PHGDHO43175 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHGDHO43175 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PHGDHO43175 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 KRT8P17-201ENST00000453110 1448 ntBASIC19.78■□□□□ 0.76
PHGDHO43175 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 TREX1-205ENST00000625293 1783 ntBASIC19.78■□□□□ 0.76
PHGDHO43175 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PHGDHO43175 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.78■□□□□ 0.76
PHGDHO43175 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 AL162430.1-201ENST00000480705 870 ntBASIC19.78■□□□□ 0.76
PHGDHO43175 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.78■□□□□ 0.76
PHGDHO43175 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.78■□□□□ 0.76
PHGDHO43175 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PHGDHO43175 BID-214ENST00000617586 542 ntTSL 5 BASIC19.78■□□□□ 0.76
PHGDHO43175 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.78■□□□□ 0.76
PHGDHO43175 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHGDHO43175 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.77■□□□□ 0.76
PHGDHO43175 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.77■□□□□ 0.76
PHGDHO43175 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.77■□□□□ 0.76
PHGDHO43175 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.77■□□□□ 0.76
PHGDHO43175 CYP2T3P-201ENST00000601990 817 ntBASIC19.77■□□□□ 0.76
PHGDHO43175 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms