Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.31■■□□□ 1.8
APAF1O14727 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.31■■□□□ 1.8
APAF1O14727 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
APAF1O14727 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
APAF1O14727 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
APAF1O14727 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
APAF1O14727 KRT16P6-202ENST00000425692 1426 ntBASIC26.31■■□□□ 1.8
APAF1O14727 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC26.3■■□□□ 1.8
APAF1O14727 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
APAF1O14727 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.3■■□□□ 1.8
APAF1O14727 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.3■■□□□ 1.8
APAF1O14727 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
APAF1O14727 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.3■■□□□ 1.8
APAF1O14727 SOX15-203ENST00000570788 1093 ntBASIC26.3■■□□□ 1.8
APAF1O14727 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.3■■□□□ 1.8
APAF1O14727 AC008403.3-201ENST00000598924 454 ntBASIC26.3■■□□□ 1.8
APAF1O14727 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.3■■□□□ 1.8
APAF1O14727 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 AFG3L1P-217ENST00000557444 2447 ntBASIC26.3■■□□□ 1.8
APAF1O14727 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC26.3■■□□□ 1.8
APAF1O14727 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
APAF1O14727 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
APAF1O14727 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
APAF1O14727 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.29■■□□□ 1.8
APAF1O14727 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.29■■□□□ 1.8
APAF1O14727 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
APAF1O14727 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.29■■□□□ 1.8
APAF1O14727 LBX2-AS1-202ENST00000603175 2083 ntBASIC26.29■■□□□ 1.8
APAF1O14727 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
APAF1O14727 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.28■■□□□ 1.8
APAF1O14727 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
APAF1O14727 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC26.28■■□□□ 1.8
APAF1O14727 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
APAF1O14727 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
APAF1O14727 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
APAF1O14727 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.28■■□□□ 1.8
APAF1O14727 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
APAF1O14727 UNC93B4-201ENST00000505679 747 ntBASIC26.28■■□□□ 1.8
APAF1O14727 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.28■■□□□ 1.8
APAF1O14727 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.28■■□□□ 1.8
APAF1O14727 MIR4651-201ENST00000582622 73 ntBASIC26.28■■□□□ 1.8
APAF1O14727 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
APAF1O14727 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
APAF1O14727 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
APAF1O14727 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
APAF1O14727 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
APAF1O14727 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.28■■□□□ 1.8
APAF1O14727 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC26.27■■□□□ 1.8
APAF1O14727 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
APAF1O14727 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
APAF1O14727 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
APAF1O14727 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.27■■□□□ 1.8
APAF1O14727 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
APAF1O14727 CD99P1-205ENST00000527459 561 ntBASIC26.27■■□□□ 1.8
APAF1O14727 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
APAF1O14727 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
APAF1O14727 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
APAF1O14727 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
APAF1O14727 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
APAF1O14727 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
APAF1O14727 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
APAF1O14727 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.26■■□□□ 1.79
APAF1O14727 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.26■■□□□ 1.79
APAF1O14727 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.26■■□□□ 1.79
APAF1O14727 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
APAF1O14727 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
APAF1O14727 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.25■■□□□ 1.79
APAF1O14727 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
APAF1O14727 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms