Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC32.63■■■□□ 2.81
CHD1O14646 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC32.63■■■□□ 2.81
CHD1O14646 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC32.63■■■□□ 2.81
CHD1O14646 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC32.63■■■□□ 2.81
CHD1O14646 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CHD1O14646 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CHD1O14646 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC32.63■■■□□ 2.81
CHD1O14646 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC32.63■■■□□ 2.81
CHD1O14646 AP000692.2-201ENST00000608391 879 ntBASIC32.63■■■□□ 2.81
CHD1O14646 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CHD1O14646 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC32.62■■■□□ 2.81
CHD1O14646 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC32.62■■■□□ 2.81
CHD1O14646 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHD1O14646 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHD1O14646 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC32.62■■■□□ 2.81
CHD1O14646 KRT17P6-201ENST00000453795 1220 ntBASIC32.62■■■□□ 2.81
CHD1O14646 ZNF444P1-201ENST00000559497 298 ntBASIC32.62■■■□□ 2.81
CHD1O14646 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC32.62■■■□□ 2.81
CHD1O14646 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC32.62■■■□□ 2.81
CHD1O14646 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC32.62■■■□□ 2.81
CHD1O14646 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CHD1O14646 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CHD1O14646 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHD1O14646 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC32.61■■■□□ 2.81
CHD1O14646 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC32.61■■■□□ 2.81
CHD1O14646 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC32.61■■■□□ 2.81
CHD1O14646 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC32.61■■■□□ 2.81
CHD1O14646 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHD1O14646 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CHD1O14646 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC32.61■■■□□ 2.81
CHD1O14646 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
CHD1O14646 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC32.61■■■□□ 2.81
CHD1O14646 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC32.61■■■□□ 2.81
CHD1O14646 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1O14646 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1O14646 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
CHD1O14646 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1O14646 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
CHD1O14646 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
CHD1O14646 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC32.6■■■□□ 2.81
CHD1O14646 SDHD-206ENST00000528182 754 ntTSL 3 BASIC32.6■■■□□ 2.81
CHD1O14646 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC32.6■■■□□ 2.81
CHD1O14646 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC32.6■■■□□ 2.81
CHD1O14646 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC32.6■■■□□ 2.81
CHD1O14646 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1O14646 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC32.6■■■□□ 2.81
CHD1O14646 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1O14646 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1O14646 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC32.6■■■□□ 2.81
CHD1O14646 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1O14646 CALM3-202ENST00000391918 702 ntTSL 2 BASIC32.6■■■□□ 2.81
CHD1O14646 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC32.6■■■□□ 2.81
CHD1O14646 CNP-204ENST00000472031 1019 ntTSL 2 BASIC32.6■■■□□ 2.81
CHD1O14646 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC32.6■■■□□ 2.81
CHD1O14646 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHD1O14646 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHD1O14646 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
CHD1O14646 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHD1O14646 ETFA-216ENST00000560726 942 ntTSL 3 BASIC32.59■■■□□ 2.81
CHD1O14646 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
CHD1O14646 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC32.59■■■□□ 2.81
CHD1O14646 AC011298.2-201ENST00000617989 482 ntBASIC32.59■■■□□ 2.81
CHD1O14646 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHD1O14646 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC32.59■■■□□ 2.81
CHD1O14646 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CHD1O14646 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC32.58■■■□□ 2.81
CHD1O14646 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CHD1O14646 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC32.58■■■□□ 2.81
CHD1O14646 CALM1-205ENST00000553542 877 ntTSL 5 BASIC32.58■■■□□ 2.81
CHD1O14646 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
CHD1O14646 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CHD1O14646 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CHD1O14646 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
CHD1O14646 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
CHD1O14646 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.81
CHD1O14646 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
CHD1O14646 SLC25A1P2-201ENST00000430693 912 ntBASIC32.57■■■□□ 2.81
CHD1O14646 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC32.57■■■□□ 2.81
CHD1O14646 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
CHD1O14646 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CHD1O14646 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
CHD1O14646 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CHD1O14646 AL136038.3-201ENST00000561909 1096 ntBASIC32.57■■■□□ 2.8
CHD1O14646 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CHD1O14646 AC131212.4-201ENST00000623606 975 ntBASIC32.57■■■□□ 2.8
CHD1O14646 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC32.57■■■□□ 2.8
CHD1O14646 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CHD1O14646 AC092338.2-201ENST00000568827 1415 ntBASIC32.56■■■□□ 2.8
CHD1O14646 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CHD1O14646 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC32.56■■■□□ 2.8
CHD1O14646 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CHD1O14646 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CHD1O14646 AL022342.1-201ENST00000400363 863 ntBASIC32.56■■■□□ 2.8
CHD1O14646 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC32.56■■■□□ 2.8
CHD1O14646 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
CHD1O14646 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
CHD1O14646 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CHD1O14646 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CHD1O14646 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC32.55■■■□□ 2.8
CHD1O14646 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC32.55■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms