Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFRD1O00458 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFRD1O00458 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFRD1O00458 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFRD1O00458 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.69■□□□□ 0.74
IFRD1O00458 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFRD1O00458 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFRD1O00458 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.68■□□□□ 0.74
IFRD1O00458 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 AL390719.1-204ENST00000412397 1219 ntBASIC19.68■□□□□ 0.74
IFRD1O00458 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.68■□□□□ 0.74
IFRD1O00458 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.68■□□□□ 0.74
IFRD1O00458 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.68■□□□□ 0.74
IFRD1O00458 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.68■□□□□ 0.74
IFRD1O00458 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
IFRD1O00458 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFRD1O00458 DPP3P2-201ENST00000416030 1696 ntBASIC19.68■□□□□ 0.74
IFRD1O00458 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
IFRD1O00458 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.68■□□□□ 0.74
IFRD1O00458 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.67■□□□□ 0.74
IFRD1O00458 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.67■□□□□ 0.74
IFRD1O00458 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IFRD1O00458 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IFRD1O00458 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.67■□□□□ 0.74
IFRD1O00458 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.67■□□□□ 0.74
IFRD1O00458 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.67■□□□□ 0.74
IFRD1O00458 PNMA6B-201ENST00000538162 1200 ntBASIC19.67■□□□□ 0.74
IFRD1O00458 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.67■□□□□ 0.74
IFRD1O00458 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.67■□□□□ 0.74
IFRD1O00458 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.67■□□□□ 0.74
IFRD1O00458 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
IFRD1O00458 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IFRD1O00458 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
IFRD1O00458 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.66■□□□□ 0.74
IFRD1O00458 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.66■□□□□ 0.74
IFRD1O00458 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 AL391422.3-201ENST00000603791 2761 ntBASIC19.66■□□□□ 0.74
IFRD1O00458 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.66■□□□□ 0.74
IFRD1O00458 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.66■□□□□ 0.74
IFRD1O00458 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.66■□□□□ 0.74
IFRD1O00458 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.66■□□□□ 0.74
IFRD1O00458 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
IFRD1O00458 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.66■□□□□ 0.74
IFRD1O00458 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFRD1O00458 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.66■□□□□ 0.74
IFRD1O00458 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
IFRD1O00458 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
IFRD1O00458 AL512408.1-201ENST00000569378 2000 ntBASIC19.65■□□□□ 0.74
IFRD1O00458 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
IFRD1O00458 HLA-G-202ENST00000376815 851 ntBASIC19.65■□□□□ 0.74
IFRD1O00458 HLA-G-203ENST00000376818 1127 ntBASIC19.65■□□□□ 0.74
IFRD1O00458 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 AC023632.3-201ENST00000521633 145 ntBASIC19.65■□□□□ 0.74
IFRD1O00458 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.65■□□□□ 0.74
IFRD1O00458 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
IFRD1O00458 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.65■□□□□ 0.74
IFRD1O00458 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFRD1O00458 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFRD1O00458 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
IFRD1O00458 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFRD1O00458 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms