Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.26■□□□□ 0.99
O00370 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.26■□□□□ 0.99
O00370 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
O00370 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
O00370 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.25■□□□□ 0.99
O00370 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.25■□□□□ 0.99
O00370 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.25■□□□□ 0.99
O00370 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.25■□□□□ 0.99
O00370 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.25■□□□□ 0.99
O00370 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
O00370 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.25■□□□□ 0.99
O00370 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.25■□□□□ 0.99
O00370 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
O00370 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
O00370 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.24■□□□□ 0.99
O00370 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.24■□□□□ 0.99
O00370 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 AC092368.3-202ENST00000574180 1591 ntBASIC21.24■□□□□ 0.99
O00370 BX119927.1-201ENST00000636596 1552 ntBASIC21.24■□□□□ 0.99
O00370 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.24■□□□□ 0.99
O00370 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
O00370 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
O00370 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
O00370 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.24■□□□□ 0.99
O00370 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.24■□□□□ 0.99
O00370 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.24■□□□□ 0.99
O00370 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.24■□□□□ 0.99
O00370 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.24■□□□□ 0.99
O00370 PNMA6B-201ENST00000538162 1200 ntBASIC21.24■□□□□ 0.99
O00370 AC005829.2-201ENST00000571422 1056 ntBASIC21.24■□□□□ 0.99
O00370 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.24■□□□□ 0.99
O00370 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.24■□□□□ 0.99
O00370 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
O00370 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.24■□□□□ 0.99
O00370 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.24■□□□□ 0.99
O00370 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
O00370 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
O00370 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
O00370 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
O00370 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.23■□□□□ 0.99
O00370 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.23■□□□□ 0.99
O00370 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.23■□□□□ 0.99
O00370 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.23■□□□□ 0.99
O00370 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.23■□□□□ 0.99
O00370 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
O00370 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.23■□□□□ 0.99
O00370 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 KRT18P6-201ENST00000555540 1265 ntBASIC21.23■□□□□ 0.99
O00370 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.23■□□□□ 0.99
O00370 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
O00370 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.22■□□□□ 0.99
O00370 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.22■□□□□ 0.99
O00370 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
O00370 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 HLA-G-202ENST00000376815 851 ntBASIC21.22■□□□□ 0.99
O00370 HLA-G-203ENST00000376818 1127 ntBASIC21.22■□□□□ 0.99
O00370 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.22■□□□□ 0.99
O00370 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.22■□□□□ 0.99
O00370 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.22■□□□□ 0.99
O00370 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.22■□□□□ 0.99
O00370 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms