Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.92■□□□□ 0.62
PDLIM1O00151 AC034268.1-201ENST00000441047 882 ntBASIC18.92■□□□□ 0.62
PDLIM1O00151 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.92■□□□□ 0.62
PDLIM1O00151 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM1O00151 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM1O00151 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM1O00151 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM1O00151 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM1O00151 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM1O00151 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM1O00151 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM1O00151 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM1O00151 AC005224.4-201ENST00000583262 1652 ntBASIC18.92■□□□□ 0.62
PDLIM1O00151 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDLIM1O00151 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
PDLIM1O00151 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
PDLIM1O00151 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM1O00151 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM1O00151 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDLIM1O00151 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM1O00151 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PDLIM1O00151 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 KRT18P14-201ENST00000534205 1250 ntBASIC18.91■□□□□ 0.62
PDLIM1O00151 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM1O00151 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM1O00151 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.91■□□□□ 0.62
PDLIM1O00151 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM1O00151 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 AC007613.1-201ENST00000572811 2597 ntBASIC18.91■□□□□ 0.62
PDLIM1O00151 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDLIM1O00151 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM1O00151 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.91■□□□□ 0.62
PDLIM1O00151 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PDLIM1O00151 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM1O00151 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 AC079598.2-202ENST00000546624 1451 ntBASIC18.9■□□□□ 0.62
PDLIM1O00151 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM1O00151 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.9■□□□□ 0.62
PDLIM1O00151 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM1O00151 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.9■□□□□ 0.62
PDLIM1O00151 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PDLIM1O00151 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.9■□□□□ 0.62
PDLIM1O00151 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
PDLIM1O00151 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM1O00151 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.9■□□□□ 0.62
PDLIM1O00151 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM1O00151 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.89■□□□□ 0.62
PDLIM1O00151 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
PDLIM1O00151 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
PDLIM1O00151 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.89■□□□□ 0.61
PDLIM1O00151 AC093503.3-201ENST00000624917 2352 ntBASIC18.89■□□□□ 0.61
PDLIM1O00151 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.89■□□□□ 0.61
PDLIM1O00151 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDLIM1O00151 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM1O00151 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM1O00151 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM1O00151 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM1O00151 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.89■□□□□ 0.61
PDLIM1O00151 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM1O00151 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms