Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM235A6NFC5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17■□□□□ 0.31
TMEM235A6NFC5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17■□□□□ 0.31
TMEM235A6NFC5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17■□□□□ 0.31
TMEM235A6NFC5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17■□□□□ 0.31
TMEM235A6NFC5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17■□□□□ 0.31
TMEM235A6NFC5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM235A6NFC5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM235A6NFC5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17■□□□□ 0.31
TMEM235A6NFC5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17■□□□□ 0.31
TMEM235A6NFC5 AC093503.3-201ENST00000624917 2352 ntBASIC17■□□□□ 0.31
TMEM235A6NFC5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM235A6NFC5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17■□□□□ 0.31
TMEM235A6NFC5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM235A6NFC5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 AC091799.1-201ENST00000422823 811 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4L2-201ENST00000561772 1275 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 FAM21FP-204ENST00000608637 956 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 AL358852.1-201ENST00000623174 1268 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4L6-201ENST00000626483 1275 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4L1-201ENST00000627662 1275 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4L8-201ENST00000629013 1275 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4L3-201ENST00000630187 1275 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4L7-201ENST00000630678 1275 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 DUX4L5-201ENST00000630834 1275 ntBASIC16.99■□□□□ 0.31
TMEM235A6NFC5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM235A6NFC5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM235A6NFC5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 AC104187.1-201ENST00000607510 612 ntBASIC16.97■□□□□ 0.31
TMEM235A6NFC5 AL136967.2-201ENST00000623968 743 ntBASIC16.97■□□□□ 0.31
TMEM235A6NFC5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms