Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRABD2BA6NFA1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRABD2BA6NFA1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRABD2BA6NFA1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRABD2BA6NFA1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
TRABD2BA6NFA1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRABD2BA6NFA1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 AC004264.1-201ENST00000608354 794 ntBASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRABD2BA6NFA1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRABD2BA6NFA1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 AC026310.3-201ENST00000625186 2373 ntBASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 AC124283.5-201ENST00000624661 1809 ntBASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.17■□□□□ 0.66
TRABD2BA6NFA1 AL121603.2-201ENST00000557373 2117 ntBASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 LIN28AP1-201ENST00000429574 405 ntBASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 AC116562.2-201ENST00000507042 360 ntBASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRABD2BA6NFA1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 CR392000.1-201ENST00000624770 1228 ntBASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRABD2BA6NFA1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms