Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRDV1A0A1B0GX56 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 MIR572-201ENST00000384983 95 ntBASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 FAM21FP-204ENST00000608637 956 ntBASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.52■□□□□ 0.4
TRDV1A0A1B0GX56 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRDV1A0A1B0GX56 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 CROCCP3-202ENST00000420820 1947 ntBASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 AL035685.1-201ENST00000636663 812 ntBASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.51■□□□□ 0.39
TRDV1A0A1B0GX56 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 KRT87P-202ENST00000534226 1464 ntBASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 AC079598.2-202ENST00000546624 1451 ntBASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 AC131281.2-201ENST00000520478 145 ntBASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRDV1A0A1B0GX56 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRDV1A0A1B0GX56 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms