Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 SNORA78-201ENST00000459373 127 ntBASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 RARRES2P10-201ENST00000564312 460 ntBASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 KRT16P6-202ENST00000425692 1426 ntBASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 AL135905.2-201ENST00000584934 1404 ntBASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPVL3A0A0U1RRI6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 SMG8-203ENST00000578922 2178 ntBASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 KRT16P5-201ENST00000455284 522 ntBASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 AP001412.1-201ENST00000608405 714 ntBASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPVL3A0A0U1RRI6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 AL049637.2-201ENST00000641778 930 ntBASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPVL3A0A0U1RRI6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
CENPVL3A0A0U1RRI6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 AC004264.1-201ENST00000608354 794 ntBASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPVL3A0A0U1RRI6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.13■□□□□ 0.17
CENPVL3A0A0U1RRI6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms