Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 FAM197Y4-202ENST00000622692 608 ntBASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC066615.1-201ENST00000640911 628 ntBASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.4□□□□□ -0.1
IGHV4-28A0A0C4DH34 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 RPPH1-201ENST00000516869 333 ntBASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 AL359736.2-201ENST00000621992 437 ntBASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 KRT8P17-201ENST00000453110 1448 ntBASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV4-28A0A0C4DH34 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC124283.5-201ENST00000624661 1809 ntBASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC239809.2-201ENST00000415381 517 ntBASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 MTDHP1-201ENST00000605323 784 ntBASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-28A0A0C4DH34 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms