Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV26-1A0A087WT03 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV26-1A0A087WT03 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 AC006128.1-201ENST00000624704 1661 ntBASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 MCRIP2P1-201ENST00000394346 511 ntBASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 TSPY6P-201ENST00000448518 926 ntBASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 AC100791.3-201ENST00000617619 330 ntBASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 AC005082.1-201ENST00000413042 2259 ntBASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV26-1A0A087WT03 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 BX276092.2-201ENST00000417668 665 ntBASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 PGM5P4-201ENST00000421970 445 ntBASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 AL355472.2-201ENST00000422958 438 ntBASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 AC104771.1-201ENST00000603335 964 ntBASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 CYP21A1P-202ENST00000354927 1481 ntBASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV26-1A0A087WT03 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 AC104581.1-202ENST00000635932 2618 ntBASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 AL355802.2-201ENST00000402069 882 ntBASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 LSM12P1-201ENST00000411836 588 ntBASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV26-1A0A087WT03 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 AC027702.1-201ENST00000563810 1770 ntBASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 FP700111.2-201ENST00000619190 1892 ntBASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 CYP2T3P-201ENST00000601990 817 ntBASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms