Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ARFGEF1Q9Y6D6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
ARFGEF1Q9Y6D6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.61■■■□□ 2.81
ARFGEF1Q9Y6D6 AL033527.3-201ENST00000566366 1196 ntBASIC32.61■■■□□ 2.81
ARFGEF1Q9Y6D6 AC018358.1-201ENST00000631079 1402 ntBASIC32.6■■■□□ 2.81
ARFGEF1Q9Y6D6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ARFGEF1Q9Y6D6 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.58■■■□□ 2.81
ARFGEF1Q9Y6D6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ARFGEF1Q9Y6D6 AC022413.1-201ENST00000624602 984 ntBASIC32.56■■■□□ 2.8
ARFGEF1Q9Y6D6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ARFGEF1Q9Y6D6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ARFGEF1Q9Y6D6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
ARFGEF1Q9Y6D6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.54■■■□□ 2.8
ARFGEF1Q9Y6D6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.54■■■□□ 2.8
ARFGEF1Q9Y6D6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ARFGEF1Q9Y6D6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ARFGEF1Q9Y6D6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.53■■■□□ 2.8
ARFGEF1Q9Y6D6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ARFGEF1Q9Y6D6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ARFGEF1Q9Y6D6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
ARFGEF1Q9Y6D6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.51■■■□□ 2.79
ARFGEF1Q9Y6D6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ARFGEF1Q9Y6D6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ARFGEF1Q9Y6D6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.49■■■□□ 2.79
ARFGEF1Q9Y6D6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.49■■■□□ 2.79
ARFGEF1Q9Y6D6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.47■■■□□ 2.79
ARFGEF1Q9Y6D6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
ARFGEF1Q9Y6D6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
ARFGEF1Q9Y6D6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
ARFGEF1Q9Y6D6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.47■■■□□ 2.79
ARFGEF1Q9Y6D6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.47■■■□□ 2.79
ARFGEF1Q9Y6D6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
ARFGEF1Q9Y6D6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.44■■■□□ 2.78
ARFGEF1Q9Y6D6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
ARFGEF1Q9Y6D6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.42■■■□□ 2.78
ARFGEF1Q9Y6D6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.42■■■□□ 2.78
ARFGEF1Q9Y6D6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
ARFGEF1Q9Y6D6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.42■■■□□ 2.78
ARFGEF1Q9Y6D6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
ARFGEF1Q9Y6D6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
ARFGEF1Q9Y6D6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ARFGEF1Q9Y6D6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ARFGEF1Q9Y6D6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
ARFGEF1Q9Y6D6 U85056.1-201ENST00000616429 682 ntBASIC32.4■■■□□ 2.78
ARFGEF1Q9Y6D6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ARFGEF1Q9Y6D6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.4■■■□□ 2.78
ARFGEF1Q9Y6D6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ARFGEF1Q9Y6D6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.4■■■□□ 2.78
ARFGEF1Q9Y6D6 KRT18P60-201ENST00000312876 1297 ntBASIC32.39■■■□□ 2.78
ARFGEF1Q9Y6D6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
ARFGEF1Q9Y6D6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
ARFGEF1Q9Y6D6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.38■■■□□ 2.77
ARFGEF1Q9Y6D6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.37■■■□□ 2.77
ARFGEF1Q9Y6D6 AC060814.1-201ENST00000554326 538 ntBASIC32.37■■■□□ 2.77
ARFGEF1Q9Y6D6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.37■■■□□ 2.77
ARFGEF1Q9Y6D6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
ARFGEF1Q9Y6D6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.37■■■□□ 2.77
ARFGEF1Q9Y6D6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ARFGEF1Q9Y6D6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.35■■■□□ 2.77
ARFGEF1Q9Y6D6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ARFGEF1Q9Y6D6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.33■■■□□ 2.77
ARFGEF1Q9Y6D6 RARRES2P1-201ENST00000474487 481 ntBASIC32.33■■■□□ 2.77
ARFGEF1Q9Y6D6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
ARFGEF1Q9Y6D6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.31■■■□□ 2.76
ARFGEF1Q9Y6D6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
ARFGEF1Q9Y6D6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ARFGEF1Q9Y6D6 TSPY13P-201ENST00000338964 914 ntBASIC32.3■■■□□ 2.76
ARFGEF1Q9Y6D6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.3■■■□□ 2.76
ARFGEF1Q9Y6D6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
ARFGEF1Q9Y6D6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
ARFGEF1Q9Y6D6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.3■■■□□ 2.76
ARFGEF1Q9Y6D6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
ARFGEF1Q9Y6D6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
ARFGEF1Q9Y6D6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.28■■■□□ 2.76
ARFGEF1Q9Y6D6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
ARFGEF1Q9Y6D6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.27■■■□□ 2.76
ARFGEF1Q9Y6D6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
ARFGEF1Q9Y6D6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.25■■■□□ 2.75
ARFGEF1Q9Y6D6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.25■■■□□ 2.75
ARFGEF1Q9Y6D6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
ARFGEF1Q9Y6D6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.24■■■□□ 2.75
ARFGEF1Q9Y6D6 AC148477.6-201ENST00000623746 465 ntBASIC32.24■■■□□ 2.75
ARFGEF1Q9Y6D6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
ARFGEF1Q9Y6D6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
ARFGEF1Q9Y6D6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.22■■■□□ 2.75
ARFGEF1Q9Y6D6 AC092296.2-201ENST00000589470 999 ntBASIC32.22■■■□□ 2.75
ARFGEF1Q9Y6D6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.21■■■□□ 2.75
ARFGEF1Q9Y6D6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.21■■■□□ 2.75
ARFGEF1Q9Y6D6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.2■■■□□ 2.74
ARFGEF1Q9Y6D6 AC004987.1-201ENST00000428627 508 ntBASIC32.19■■■□□ 2.74
ARFGEF1Q9Y6D6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
ARFGEF1Q9Y6D6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
ARFGEF1Q9Y6D6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
ARFGEF1Q9Y6D6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
ARFGEF1Q9Y6D6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
ARFGEF1Q9Y6D6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.16■■■□□ 2.74
ARFGEF1Q9Y6D6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ARFGEF1Q9Y6D6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ARFGEF1Q9Y6D6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
ARFGEF1Q9Y6D6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC32.16■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms