Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.79■■□□□ 1.4
TM9SF2Q99805 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.79■■□□□ 1.4
TM9SF2Q99805 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TM9SF2Q99805 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.78■■□□□ 1.4
TM9SF2Q99805 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.78■■□□□ 1.4
TM9SF2Q99805 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM9SF2Q99805 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM9SF2Q99805 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM9SF2Q99805 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM9SF2Q99805 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM9SF2Q99805 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM9SF2Q99805 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
TM9SF2Q99805 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TM9SF2Q99805 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TM9SF2Q99805 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TM9SF2Q99805 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM9SF2Q99805 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.77■■□□□ 1.4
TM9SF2Q99805 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TM9SF2Q99805 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TM9SF2Q99805 AC108673.1-201ENST00000510422 1159 ntBASIC23.76■■□□□ 1.39
TM9SF2Q99805 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TM9SF2Q99805 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TM9SF2Q99805 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.75■■□□□ 1.39
TM9SF2Q99805 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TM9SF2Q99805 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TM9SF2Q99805 MIR7108-201ENST00000614319 87 ntBASIC23.73■■□□□ 1.39
TM9SF2Q99805 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TM9SF2Q99805 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TM9SF2Q99805 DUX4L29-201ENST00000425409 679 ntBASIC23.72■■□□□ 1.39
TM9SF2Q99805 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.72■■□□□ 1.39
TM9SF2Q99805 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TM9SF2Q99805 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TM9SF2Q99805 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.71■■□□□ 1.39
TM9SF2Q99805 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.71■■□□□ 1.39
TM9SF2Q99805 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.71■■□□□ 1.39
TM9SF2Q99805 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TM9SF2Q99805 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.7■■□□□ 1.38
TM9SF2Q99805 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TM9SF2Q99805 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.69■■□□□ 1.38
TM9SF2Q99805 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TM9SF2Q99805 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TM9SF2Q99805 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TM9SF2Q99805 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TM9SF2Q99805 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TM9SF2Q99805 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TM9SF2Q99805 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TM9SF2Q99805 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.68■■□□□ 1.38
TM9SF2Q99805 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TM9SF2Q99805 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TM9SF2Q99805 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.67■■□□□ 1.38
TM9SF2Q99805 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TM9SF2Q99805 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TM9SF2Q99805 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TM9SF2Q99805 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TM9SF2Q99805 ZNRF2P2-203ENST00000454624 420 ntBASIC23.66■■□□□ 1.38
TM9SF2Q99805 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TM9SF2Q99805 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TM9SF2Q99805 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.66■■□□□ 1.38
TM9SF2Q99805 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TM9SF2Q99805 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.65■■□□□ 1.38
TM9SF2Q99805 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.65■■□□□ 1.38
TM9SF2Q99805 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.65■■□□□ 1.38
TM9SF2Q99805 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TM9SF2Q99805 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.63■■□□□ 1.37
TM9SF2Q99805 MIR6090-201ENST00000622481 60 ntBASIC23.63■■□□□ 1.37
TM9SF2Q99805 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TM9SF2Q99805 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TM9SF2Q99805 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TM9SF2Q99805 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TM9SF2Q99805 AC142086.6-201ENST00000621154 1765 ntBASIC23.62■■□□□ 1.37
TM9SF2Q99805 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TM9SF2Q99805 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TM9SF2Q99805 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TM9SF2Q99805 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TM9SF2Q99805 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
TM9SF2Q99805 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TM9SF2Q99805 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
TM9SF2Q99805 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.6■■□□□ 1.37
TM9SF2Q99805 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.6■■□□□ 1.37
TM9SF2Q99805 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.6■■□□□ 1.37
TM9SF2Q99805 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TM9SF2Q99805 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TM9SF2Q99805 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TM9SF2Q99805 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.59■■□□□ 1.37
TM9SF2Q99805 AC021231.2-201ENST00000594613 730 ntBASIC23.59■■□□□ 1.37
TM9SF2Q99805 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TM9SF2Q99805 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TM9SF2Q99805 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TM9SF2Q99805 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TM9SF2Q99805 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TM9SF2Q99805 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.58■■□□□ 1.37
TM9SF2Q99805 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TM9SF2Q99805 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TM9SF2Q99805 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.57■■□□□ 1.36
TM9SF2Q99805 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TM9SF2Q99805 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TM9SF2Q99805 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TM9SF2Q99805 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
TM9SF2Q99805 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
TM9SF2Q99805 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms