Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM11Q96F44 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM11Q96F44 AC127502.1-201ENST00000399971 1502 ntBASIC27.43■■□□□ 1.98
TRIM11Q96F44 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM11Q96F44 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.43■■□□□ 1.98
TRIM11Q96F44 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.41■■□□□ 1.98
TRIM11Q96F44 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.41■■□□□ 1.98
TRIM11Q96F44 AC005559.1-201ENST00000589661 871 ntBASIC27.41■■□□□ 1.98
TRIM11Q96F44 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
TRIM11Q96F44 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM11Q96F44 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.4■■□□□ 1.98
TRIM11Q96F44 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM11Q96F44 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM11Q96F44 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
TRIM11Q96F44 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TRIM11Q96F44 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM11Q96F44 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.38■■□□□ 1.97
TRIM11Q96F44 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.38■■□□□ 1.97
TRIM11Q96F44 DRD5P2-201ENST00000421395 2012 ntBASIC27.38■■□□□ 1.97
TRIM11Q96F44 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TRIM11Q96F44 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
TRIM11Q96F44 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM11Q96F44 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.36■■□□□ 1.97
TRIM11Q96F44 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TRIM11Q96F44 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
TRIM11Q96F44 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TRIM11Q96F44 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM11Q96F44 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.35■■□□□ 1.97
TRIM11Q96F44 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM11Q96F44 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.34■■□□□ 1.97
TRIM11Q96F44 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM11Q96F44 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.33■■□□□ 1.97
TRIM11Q96F44 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM11Q96F44 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.33■■□□□ 1.97
TRIM11Q96F44 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM11Q96F44 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.96
TRIM11Q96F44 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM11Q96F44 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
TRIM11Q96F44 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM11Q96F44 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.32■■□□□ 1.96
TRIM11Q96F44 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM11Q96F44 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM11Q96F44 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM11Q96F44 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
TRIM11Q96F44 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM11Q96F44 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM11Q96F44 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM11Q96F44 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM11Q96F44 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM11Q96F44 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM11Q96F44 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.28■■□□□ 1.96
TRIM11Q96F44 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM11Q96F44 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM11Q96F44 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.28■■□□□ 1.96
TRIM11Q96F44 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
TRIM11Q96F44 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM11Q96F44 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM11Q96F44 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM11Q96F44 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM11Q96F44 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM11Q96F44 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.25■■□□□ 1.95
TRIM11Q96F44 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIM11Q96F44 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.25■■□□□ 1.95
TRIM11Q96F44 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.25■■□□□ 1.95
TRIM11Q96F44 AC108673.1-201ENST00000510422 1159 ntBASIC27.25■■□□□ 1.95
TRIM11Q96F44 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM11Q96F44 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM11Q96F44 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM11Q96F44 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
TRIM11Q96F44 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM11Q96F44 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM11Q96F44 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.23■■□□□ 1.95
TRIM11Q96F44 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM11Q96F44 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM11Q96F44 MIR3665-201ENST00000578708 105 ntBASIC27.22■■□□□ 1.95
TRIM11Q96F44 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM11Q96F44 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM11Q96F44 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.21■■□□□ 1.95
TRIM11Q96F44 DUX4L28-201ENST00000623687 678 ntBASIC27.21■■□□□ 1.95
TRIM11Q96F44 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.21■■□□□ 1.95
TRIM11Q96F44 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.2■■□□□ 1.94
TRIM11Q96F44 AP006261.1-201ENST00000584783 668 ntBASIC27.2■■□□□ 1.94
TRIM11Q96F44 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TRIM11Q96F44 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM11Q96F44 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM11Q96F44 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM11Q96F44 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
TRIM11Q96F44 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
TRIM11Q96F44 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.17■■□□□ 1.94
TRIM11Q96F44 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM11Q96F44 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM11Q96F44 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM11Q96F44 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
TRIM11Q96F44 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.16■■□□□ 1.94
TRIM11Q96F44 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM11Q96F44 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRIM11Q96F44 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
TRIM11Q96F44 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TRIM11Q96F44 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
TRIM11Q96F44 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms