Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Amer2-203ENSMUST00000225247 2662 ntBASIC23.88■■□□□ 1.41
Pabpc5Q8C7D3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pabpc5Q8C7D3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pabpc5Q8C7D3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.87■■□□□ 1.41
Pabpc5Q8C7D3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.87■■□□□ 1.41
Pabpc5Q8C7D3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
Pabpc5Q8C7D3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Pabpc5Q8C7D3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pabpc5Q8C7D3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pabpc5Q8C7D3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pabpc5Q8C7D3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pabpc5Q8C7D3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pabpc5Q8C7D3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Pabpc5Q8C7D3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Pabpc5Q8C7D3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Pabpc5Q8C7D3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.84■■□□□ 1.41
Pabpc5Q8C7D3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pabpc5Q8C7D3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pabpc5Q8C7D3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pabpc5Q8C7D3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pabpc5Q8C7D3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pabpc5Q8C7D3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pabpc5Q8C7D3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.8■■□□□ 1.4
Pabpc5Q8C7D3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpc5Q8C7D3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpc5Q8C7D3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.79■■□□□ 1.4
Pabpc5Q8C7D3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpc5Q8C7D3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpc5Q8C7D3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpc5Q8C7D3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
Pabpc5Q8C7D3 Gm7432-201ENSMUST00000210343 879 ntBASIC23.77■■□□□ 1.4
Pabpc5Q8C7D3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpc5Q8C7D3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Pabpc5Q8C7D3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpc5Q8C7D3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpc5Q8C7D3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.75■■□□□ 1.39
Pabpc5Q8C7D3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
Pabpc5Q8C7D3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pabpc5Q8C7D3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pabpc5Q8C7D3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.74■■□□□ 1.39
Pabpc5Q8C7D3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pabpc5Q8C7D3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Pabpc5Q8C7D3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.73■■□□□ 1.39
Pabpc5Q8C7D3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pabpc5Q8C7D3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.72■■□□□ 1.39
Pabpc5Q8C7D3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pabpc5Q8C7D3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pabpc5Q8C7D3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Pabpc5Q8C7D3 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.72■■□□□ 1.39
Pabpc5Q8C7D3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pabpc5Q8C7D3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
Pabpc5Q8C7D3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.71■■□□□ 1.39
Pabpc5Q8C7D3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pabpc5Q8C7D3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Pabpc5Q8C7D3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pabpc5Q8C7D3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pabpc5Q8C7D3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Pabpc5Q8C7D3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.68■■□□□ 1.38
Pabpc5Q8C7D3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pabpc5Q8C7D3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pabpc5Q8C7D3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.65■■□□□ 1.38
Pabpc5Q8C7D3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pabpc5Q8C7D3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pabpc5Q8C7D3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pabpc5Q8C7D3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pabpc5Q8C7D3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pabpc5Q8C7D3 Gm30023-201ENSMUST00000197970 889 ntBASIC23.63■■□□□ 1.37
Pabpc5Q8C7D3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpc5Q8C7D3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpc5Q8C7D3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Pabpc5Q8C7D3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpc5Q8C7D3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpc5Q8C7D3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.61■■□□□ 1.37
Pabpc5Q8C7D3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.61■■□□□ 1.37
Pabpc5Q8C7D3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpc5Q8C7D3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpc5Q8C7D3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpc5Q8C7D3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.59■■□□□ 1.37
Pabpc5Q8C7D3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.36
Pabpc5Q8C7D3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pabpc5Q8C7D3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pabpc5Q8C7D3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pabpc5Q8C7D3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pabpc5Q8C7D3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Pabpc5Q8C7D3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pabpc5Q8C7D3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pabpc5Q8C7D3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pabpc5Q8C7D3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.55■■□□□ 1.36
Pabpc5Q8C7D3 Gm11599-201ENSMUST00000118720 878 ntBASIC23.55■■□□□ 1.36
Pabpc5Q8C7D3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pabpc5Q8C7D3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pabpc5Q8C7D3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pabpc5Q8C7D3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pabpc5Q8C7D3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pabpc5Q8C7D3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.54■■□□□ 1.36
Pabpc5Q8C7D3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
Pabpc5Q8C7D3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pabpc5Q8C7D3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pabpc5Q8C7D3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.53■■□□□ 1.36
Pabpc5Q8C7D3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms