Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 CWC15YDR163W 528 nt10.46□□□□□ -0.73
RPN11P43588 YDR510C-AYDR510C-A 117 nt10.46□□□□□ -0.73
RPN11P43588 VPS62YGR141W 1404 nt10.46□□□□□ -0.74
RPN11P43588 SWT21YNL187W 1074 nt10.44□□□□□ -0.74
RPN11P43588 NUP53YMR153W 1428 nt10.42□□□□□ -0.74
RPN11P43588 RRT14YIL127C 621 nt10.42□□□□□ -0.74
RPN11P43588 AIM1YAL046C 357 nt10.41□□□□□ -0.74
RPN11P43588 SFL1YOR140W 2301 nt10.4□□□□□ -0.74
RPN11P43588 TDH1YJL052W 999 nt10.38□□□□□ -0.75
RPN11P43588 URA1YKL216W 945 nt10.38□□□□□ -0.75
RPN11P43588 SRP54YPR088C 1626 nt10.37□□□□□ -0.75
RPN11P43588 YDL086WYDL086W 822 nt10.37□□□□□ -0.75
RPN11P43588 CAK1YFL029C 1107 nt10.35□□□□□ -0.75
RPN11P43588 DOC1YGL240W 753 nt10.35□□□□□ -0.75
RPN11P43588 SRY1YKL218C 981 nt10.35□□□□□ -0.75
RPN11P43588 KEL3YPL263C 1956 nt10.35□□□□□ -0.75
RPN11P43588 PUP2YGR253C 783 nt10.34□□□□□ -0.75
RPN11P43588 ELO1YJL196C 933 nt10.34□□□□□ -0.75
RPN11P43588 YKL053WYKL053W 375 nt10.34□□□□□ -0.75
RPN11P43588 PBP1YGR178C 2169 nt10.33□□□□□ -0.76
RPN11P43588 RPS6AYPL090C 711 nt10.33□□□□□ -0.76
RPN11P43588 RPS6BYBR181C 711 nt10.33□□□□□ -0.76
RPN11P43588 MET1YKR069W 1782 nt10.33□□□□□ -0.76
RPN11P43588 YML079WYML079W 606 nt10.32□□□□□ -0.76
RPN11P43588 ENT4YLL038C 744 nt10.31□□□□□ -0.76
RPN11P43588 YPT11YNL304W 1254 nt10.31□□□□□ -0.76
RPN11P43588 BXI1YNL305C 894 nt10.31□□□□□ -0.76
RPN11P43588 BIO5YNR056C 1686 nt10.31□□□□□ -0.76
RPN11P43588 YPR084WYPR084W 1371 nt10.29□□□□□ -0.76
RPN11P43588 YOR111WYOR111W 699 nt10.29□□□□□ -0.76
RPN11P43588 MAS2YHR024C 1449 nt10.27□□□□□ -0.77
RPN11P43588 YLR358CYLR358C 564 nt10.27□□□□□ -0.77
RPN11P43588 YDR476CYDR476C 675 nt10.26□□□□□ -0.77
RPN11P43588 OCH1YGL038C 1443 nt10.25□□□□□ -0.77
RPN11P43588 ATP2YJR121W 1536 nt10.25□□□□□ -0.77
RPN11P43588 RRT6YGL146C 936 nt10.25□□□□□ -0.77
RPN11P43588 YJL144WYJL144W 315 nt10.25□□□□□ -0.77
RPN11P43588 SUV3YPL029W 2214 nt10.23□□□□□ -0.77
RPN11P43588 RSM7YJR113C 744 nt10.23□□□□□ -0.77
RPN11P43588 SAN1YDR143C 1833 nt10.22□□□□□ -0.77
RPN11P43588 POR2YIL114C 846 nt10.22□□□□□ -0.77
RPN11P43588 YHL030W-AYHL030W-A 462 nt10.21□□□□□ -0.77
RPN11P43588 snR31snR31 225 nt10.21□□□□□ -0.77
RPN11P43588 SBP1YHL034C 885 nt10.2□□□□□ -0.78
RPN11P43588 NVJ2YPR091C 2313 nt10.2□□□□□ -0.78
RPN11P43588 YLR046CYLR046C 813 nt10.19□□□□□ -0.78
RPN11P43588 RDN25-1RDN25-1 3396 nt10.18□□□□□ -0.78
RPN11P43588 RDN25-2RDN25-2 3396 nt10.18□□□□□ -0.78
RPN11P43588 LAT1YNL071W 1449 nt10.18□□□□□ -0.78
RPN11P43588 YIL168WYIL168W 384 nt10.17□□□□□ -0.78
RPN11P43588 VMA11YPL234C 495 nt10.17□□□□□ -0.78
RPN11P43588 CCT2YIL142W 1584 nt10.17□□□□□ -0.78
RPN11P43588 MET22YOL064C 1074 nt10.16□□□□□ -0.78
RPN11P43588 CRC1YOR100C 984 nt10.16□□□□□ -0.78
RPN11P43588 YLR460CYLR460C 1131 nt10.15□□□□□ -0.78
RPN11P43588 SLM3YDL033C 1254 nt10.14□□□□□ -0.79
RPN11P43588 ILV3YJR016C 1758 nt10.14□□□□□ -0.79
RPN11P43588 YAL019W-AYAL019W-A 570 nt10.12□□□□□ -0.79
RPN11P43588 HAP5YOR358W 729 nt10.12□□□□□ -0.79
RPN11P43588 BOR1YNL275W 1731 nt10.12□□□□□ -0.79
RPN11P43588 ITR2YOL103W 1830 nt10.12□□□□□ -0.79
RPN11P43588 PSP2YML017W 1782 nt10.11□□□□□ -0.79
RPN11P43588 PTC6YCR079W 1329 nt10.11□□□□□ -0.79
RPN11P43588 CHS7YHR142W 951 nt10.11□□□□□ -0.79
RPN11P43588 YMR265CYMR265C 1386 nt10.1□□□□□ -0.79
RPN11P43588 PDC6YGR087C 1692 nt10.09□□□□□ -0.79
RPN11P43588 GAS1YMR307W 1680 nt10.09□□□□□ -0.79
RPN11P43588 HAC1YFL031W 717 nt10.08□□□□□ -0.8
RPN11P43588 PIH1YHR034C 1035 nt10.08□□□□□ -0.8
RPN11P43588 YOX1YML027W 1158 nt10.08□□□□□ -0.8
RPN11P43588 YIL100C-AYIL100C-A 339 nt10.06□□□□□ -0.8
RPN11P43588 PUS4YNL292W 1212 nt10.06□□□□□ -0.8
RPN11P43588 GAL83YER027C 1254 nt10.04□□□□□ -0.8
RPN11P43588 RPN14YGL004C 1254 nt10.04□□□□□ -0.8
RPN11P43588 YPT31YER031C 672 nt10.03□□□□□ -0.8
RPN11P43588 YHR219WYHR219W 1875 nt10.02□□□□□ -0.8
RPN11P43588 RNA170RNA170 169 nt10.02□□□□□ -0.81
RPN11P43588 DLD3YEL071W 1491 nt10.02□□□□□ -0.81
RPN11P43588 OLA1YBR025C 1185 nt10.01□□□□□ -0.81
RPN11P43588 NCA3YJL116C 1014 nt9.99□□□□□ -0.81
RPN11P43588 AVO2YMR068W 1281 nt9.97□□□□□ -0.81
RPN11P43588 YMR074CYMR074C 438 nt9.97□□□□□ -0.81
RPN11P43588 MCP1YOR228C 909 nt9.97□□□□□ -0.81
RPN11P43588 CPT1YNL130C 1182 nt9.96□□□□□ -0.82
RPN11P43588 ATP23YNR020C 813 nt9.96□□□□□ -0.82
RPN11P43588 YOR325WYOR325W 474 nt9.93□□□□□ -0.82
RPN11P43588 OPI10YOL032W 741 nt9.92□□□□□ -0.82
RPN11P43588 YBL111CYBL111C 2004 nt9.92□□□□□ -0.82
RPN11P43588 PNS1YOR161C 1620 nt9.91□□□□□ -0.82
RPN11P43588 UME1YPL139C 1383 nt9.9□□□□□ -0.82
RPN11P43588 PMP3YDR276C 168 nt9.9□□□□□ -0.82
RPN11P43588 ESBP6YNL125C 2022 nt9.9□□□□□ -0.82
RPN11P43588 SPR1YOR190W 1338 nt9.89□□□□□ -0.83
RPN11P43588 RHO1YPR165W 630 nt9.89□□□□□ -0.83
RPN11P43588 AAD14YNL331C 1131 nt9.88□□□□□ -0.83
RPN11P43588 CYS3YAL012W 1185 nt9.85□□□□□ -0.83
RPN11P43588 ALG12YNR030W 1656 nt9.84□□□□□ -0.83
RPN11P43588 JHD1YER051W 1479 nt9.84□□□□□ -0.83
RPN11P43588 PMU1YKL128C 888 nt9.83□□□□□ -0.84
RPN11P43588 ZIM17YNL310C 525 nt9.83□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 32.3 ms