Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
HTTP42858 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.06■■■□□ 2.4
HTTP42858 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
HTTP42858 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HTTP42858 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.05■■■□□ 2.4
HTTP42858 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
HTTP42858 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
HTTP42858 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
HTTP42858 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HTTP42858 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.03■■■□□ 2.4
HTTP42858 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HTTP42858 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
HTTP42858 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30■■■□□ 2.39
HTTP42858 TSPY13P-201ENST00000338964 914 ntBASIC30■■■□□ 2.39
HTTP42858 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30■■■□□ 2.39
HTTP42858 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
HTTP42858 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.99■■■□□ 2.39
HTTP42858 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.99■■■□□ 2.39
HTTP42858 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.99■■■□□ 2.39
HTTP42858 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HTTP42858 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
HTTP42858 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
HTTP42858 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.96■■■□□ 2.39
HTTP42858 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.95■■■□□ 2.39
HTTP42858 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.95■■■□□ 2.39
HTTP42858 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.95■■■□□ 2.38
HTTP42858 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HTTP42858 RARRES2P1-201ENST00000474487 481 ntBASIC29.94■■■□□ 2.38
HTTP42858 U85056.1-201ENST00000616429 682 ntBASIC29.94■■■□□ 2.38
HTTP42858 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HTTP42858 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
HTTP42858 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
HTTP42858 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
HTTP42858 AC022413.1-201ENST00000624602 984 ntBASIC29.93■■■□□ 2.38
HTTP42858 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.91■■■□□ 2.38
HTTP42858 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HTTP42858 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
HTTP42858 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HTTP42858 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
HTTP42858 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
HTTP42858 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.89■■■□□ 2.38
HTTP42858 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
HTTP42858 AC019069.1-201ENST00000610008 1333 ntBASIC29.89■■■□□ 2.38
HTTP42858 LINC00273-201ENST00000539813 1452 ntBASIC29.89■■■□□ 2.37
HTTP42858 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
HTTP42858 KRT18P60-201ENST00000312876 1297 ntBASIC29.87■■■□□ 2.37
HTTP42858 AL035685.1-201ENST00000636663 812 ntBASIC29.87■■■□□ 2.37
HTTP42858 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.87■■■□□ 2.37
HTTP42858 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
HTTP42858 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.86■■■□□ 2.37
HTTP42858 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
HTTP42858 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.85■■■□□ 2.37
HTTP42858 AL592295.1-201ENST00000400984 884 ntBASIC29.85■■■□□ 2.37
HTTP42858 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
HTTP42858 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
HTTP42858 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
HTTP42858 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.81■■■□□ 2.36
HTTP42858 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.81■■■□□ 2.36
HTTP42858 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
HTTP42858 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HTTP42858 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
HTTP42858 AC004987.1-201ENST00000428627 508 ntBASIC29.79■■■□□ 2.36
HTTP42858 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.79■■■□□ 2.36
HTTP42858 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
HTTP42858 AC060814.1-201ENST00000554326 538 ntBASIC29.77■■■□□ 2.36
HTTP42858 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HTTP42858 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.76■■■□□ 2.36
HTTP42858 ATP5G2P3-201ENST00000429083 425 ntBASIC29.76■■■□□ 2.36
HTTP42858 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.76■■■□□ 2.36
HTTP42858 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
HTTP42858 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.76■■■□□ 2.35
HTTP42858 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
HTTP42858 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.75■■■□□ 2.35
HTTP42858 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
HTTP42858 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.74■■■□□ 2.35
HTTP42858 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
HTTP42858 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
HTTP42858 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
HTTP42858 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.72■■■□□ 2.35
HTTP42858 AC092296.2-201ENST00000589470 999 ntBASIC29.72■■■□□ 2.35
HTTP42858 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.72■■■□□ 2.35
HTTP42858 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.72■■■□□ 2.35
HTTP42858 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HTTP42858 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.71■■■□□ 2.35
HTTP42858 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.71■■■□□ 2.35
HTTP42858 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.71■■■□□ 2.35
HTTP42858 AL451085.2-201ENST00000605085 799 ntBASIC29.71■■■□□ 2.35
HTTP42858 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HTTP42858 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.71■■■□□ 2.35
HTTP42858 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.7■■■□□ 2.35
HTTP42858 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.34
HTTP42858 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
HTTP42858 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
HTTP42858 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.69■■■□□ 2.34
HTTP42858 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
HTTP42858 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HTTP42858 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
HTTP42858 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
HTTP42858 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
HTTP42858 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms