Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 NIF3YGL221C 867 nt8.65□□□□□ -1.02
IRR1P40541 ENT4YLL038C 744 nt8.65□□□□□ -1.02
IRR1P40541 SEN2YLR105C 1134 nt8.65□□□□□ -1.02
IRR1P40541 NBA1YOL070C 1506 nt8.64□□□□□ -1.03
IRR1P40541 AGP3YFL055W 1677 nt8.63□□□□□ -1.03
IRR1P40541 PAR32YDL173W 888 nt8.63□□□□□ -1.03
IRR1P40541 TVP23YDR084C 600 nt8.63□□□□□ -1.03
IRR1P40541 CWP2YKL096W-A 279 nt8.63□□□□□ -1.03
IRR1P40541 SFL1YOR140W 2301 nt8.62□□□□□ -1.03
IRR1P40541 APS2YJR058C 444 nt8.62□□□□□ -1.03
IRR1P40541 NAP1YKR048C 1254 nt8.62□□□□□ -1.03
IRR1P40541 SNU66YOR308C 1764 nt8.61□□□□□ -1.03
IRR1P40541 SAC7YDR389W 1965 nt8.61□□□□□ -1.03
IRR1P40541 YJR114WYJR114W 393 nt8.61□□□□□ -1.03
IRR1P40541 PAM17YKR065C 594 nt8.61□□□□□ -1.03
IRR1P40541 THI6YPL214C 1623 nt8.6□□□□□ -1.03
IRR1P40541 OPI3YJR073C 621 nt8.59□□□□□ -1.03
IRR1P40541 ADE2YOR128C 1716 nt8.59□□□□□ -1.03
IRR1P40541 YLR046CYLR046C 813 nt8.57□□□□□ -1.04
IRR1P40541 LSR1LSR1 1175 nt8.57□□□□□ -1.04
IRR1P40541 AAC3YBR085W 924 nt8.57□□□□□ -1.04
IRR1P40541 YJL064WYJL064W 396 nt8.56□□□□□ -1.04
IRR1P40541 TIM44YIL022W 1296 nt8.55□□□□□ -1.04
IRR1P40541 PUP1YOR157C 786 nt8.55□□□□□ -1.04
IRR1P40541 GCD11YER025W 1584 nt8.55□□□□□ -1.04
IRR1P40541 PAU19YMR325W 375 nt8.54□□□□□ -1.04
IRR1P40541 SWP1YMR149W 861 nt8.53□□□□□ -1.04
IRR1P40541 tD(GUC)BtD(GUC)B 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)DtD(GUC)D 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)G1tD(GUC)G1 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)G2tD(GUC)G2 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)I1tD(GUC)I1 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)I2tD(GUC)I2 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)J1tD(GUC)J1 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)J2tD(GUC)J2 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)J3tD(GUC)J3 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)J4tD(GUC)J4 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)KtD(GUC)K 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)L1tD(GUC)L1 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)L2tD(GUC)L2 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)MtD(GUC)M 72 nt8.52□□□□□ -1.05
IRR1P40541 tD(GUC)OtD(GUC)O 72 nt8.52□□□□□ -1.05
IRR1P40541 YNR064CYNR064C 873 nt8.52□□□□□ -1.05
IRR1P40541 DUR3YHL016C 2208 nt8.52□□□□□ -1.05
IRR1P40541 DLD3YEL071W 1491 nt8.51□□□□□ -1.05
IRR1P40541 MGM101YJR144W 810 nt8.51□□□□□ -1.05
IRR1P40541 CDD1YLR245C 429 nt8.51□□□□□ -1.05
IRR1P40541 MIM1YOL026C 342 nt8.51□□□□□ -1.05
IRR1P40541 ALR1YOL130W 2580 nt8.51□□□□□ -1.05
IRR1P40541 RPD3YNL330C 1302 nt8.51□□□□□ -1.05
IRR1P40541 IGD1YFR017C 588 nt8.5□□□□□ -1.05
IRR1P40541 YJL211CYJL211C 444 nt8.5□□□□□ -1.05
IRR1P40541 EEB1YPL095C 1371 nt8.49□□□□□ -1.05
IRR1P40541 UFD1YGR048W 1086 nt8.49□□□□□ -1.05
IRR1P40541 FET5YFL041W 1869 nt8.49□□□□□ -1.05
IRR1P40541 NAS2YIL007C 663 nt8.48□□□□□ -1.05
IRR1P40541 AMF1YOR378W 1548 nt8.48□□□□□ -1.05
IRR1P40541 ITR2YOL103W 1830 nt8.47□□□□□ -1.05
IRR1P40541 FIT1YDR534C 1587 nt8.47□□□□□ -1.05
IRR1P40541 THP3YPR045C 1413 nt8.46□□□□□ -1.05
IRR1P40541 MAM3YOL060C 2121 nt8.46□□□□□ -1.06
IRR1P40541 FSH2YMR222C 672 nt8.45□□□□□ -1.06
IRR1P40541 KEL3YPL263C 1956 nt8.44□□□□□ -1.06
IRR1P40541 ELO1YJL196C 933 nt8.44□□□□□ -1.06
IRR1P40541 RIM2YBR192W 1134 nt8.44□□□□□ -1.06
IRR1P40541 HBS1YKR084C 1836 nt8.44□□□□□ -1.06
IRR1P40541 ENO2YHR174W 1314 nt8.44□□□□□ -1.06
IRR1P40541 DPL1YDR294C 1770 nt8.43□□□□□ -1.06
IRR1P40541 HDA1YNL021W 2121 nt8.43□□□□□ -1.06
IRR1P40541 SWT21YNL187W 1074 nt8.43□□□□□ -1.06
IRR1P40541 KRE1YNL322C 942 nt8.43□□□□□ -1.06
IRR1P40541 VMA11YPL234C 495 nt8.42□□□□□ -1.06
IRR1P40541 TIP1YBR067C 633 nt8.42□□□□□ -1.06
IRR1P40541 YPL277CYPL277C 1464 nt8.41□□□□□ -1.06
IRR1P40541 TPC1YGR096W 945 nt8.41□□□□□ -1.06
IRR1P40541 RPC31YNL151C 756 nt8.41□□□□□ -1.06
IRR1P40541 SPE2YOL052C 1191 nt8.41□□□□□ -1.06
IRR1P40541 HMT1YBR034C 1047 nt8.41□□□□□ -1.06
IRR1P40541 LEU2YCL018W 1095 nt8.41□□□□□ -1.06
IRR1P40541 SUV3YPL029W 2214 nt8.41□□□□□ -1.06
IRR1P40541 YMR265CYMR265C 1386 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)DtA(AGC)D 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)FtA(AGC)F 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)GtA(AGC)G 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)HtA(AGC)H 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)JtA(AGC)J 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)K1tA(AGC)K1 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)K2tA(AGC)K2 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)LtA(AGC)L 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)M1tA(AGC)M1 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)M2tA(AGC)M2 73 nt8.4□□□□□ -1.06
IRR1P40541 tA(AGC)PtA(AGC)P 73 nt8.4□□□□□ -1.06
IRR1P40541 LEU4YNL104C 1860 nt8.4□□□□□ -1.07
IRR1P40541 LPD1YFL018C 1500 nt8.39□□□□□ -1.07
IRR1P40541 KRR1YCL059C 951 nt8.39□□□□□ -1.07
IRR1P40541 HAP5YOR358W 729 nt8.39□□□□□ -1.07
IRR1P40541 IPL1YPL209C 1104 nt8.39□□□□□ -1.07
IRR1P40541 DUS3YLR401C 2007 nt8.39□□□□□ -1.07
IRR1P40541 SLG1YOR008C 1137 nt8.38□□□□□ -1.07
IRR1P40541 snR31snR31 225 nt8.38□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 9.8 ms