Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 tM(CAU)CtM(CAU)C 72 nt11.99□□□□□ -0.49
RIM101P33400 IMT4tM(CAU)E 72 nt11.99□□□□□ -0.49
RIM101P33400 IMT3tM(CAU)J3 72 nt11.99□□□□□ -0.49
RIM101P33400 IMT1tM(CAU)O1 72 nt11.99□□□□□ -0.49
RIM101P33400 IMT2tM(CAU)P 72 nt11.99□□□□□ -0.49
RIM101P33400 ADH4YGL256W 1149 nt11.99□□□□□ -0.49
RIM101P33400 RRF1YHR038W 693 nt11.99□□□□□ -0.49
RIM101P33400 YKL091CYKL091C 933 nt11.99□□□□□ -0.49
RIM101P33400 CTL1YMR180C 963 nt11.99□□□□□ -0.49
RIM101P33400 GET3YDL100C 1065 nt11.98□□□□□ -0.49
RIM101P33400 YDR042CYDR042C 603 nt11.98□□□□□ -0.49
RIM101P33400 DIN7YDR263C 1293 nt11.97□□□□□ -0.49
RIM101P33400 YFL021C-AYFL021C-A 855 nt11.97□□□□□ -0.49
RIM101P33400 VTA1YLR181C 993 nt11.97□□□□□ -0.49
RIM101P33400 RUF20RUF20 443 nt11.97□□□□□ -0.49
RIM101P33400 YDL114WYDL114W 927 nt11.96□□□□□ -0.49
RIM101P33400 COG2YGR120C 789 nt11.96□□□□□ -0.49
RIM101P33400 YUH1YJR099W 711 nt11.96□□□□□ -0.49
RIM101P33400 ART5YGR068C 1761 nt11.95□□□□□ -0.5
RIM101P33400 CDS1YBR029C 1374 nt11.95□□□□□ -0.5
RIM101P33400 CWP1YKL096W 720 nt11.95□□□□□ -0.5
RIM101P33400 PFA4YOL003C 1137 nt11.95□□□□□ -0.5
RIM101P33400 YFL054CYFL054C 1941 nt11.94□□□□□ -0.5
RIM101P33400 TEP1YNL128W 1305 nt11.94□□□□□ -0.5
RIM101P33400 YOL106WYOL106W 354 nt11.94□□□□□ -0.5
RIM101P33400 RRP36YOR287C 903 nt11.94□□□□□ -0.5
RIM101P33400 NSA1YGL111W 1392 nt11.93□□□□□ -0.5
RIM101P33400 YDR524W-CYDR524W-C 90 nt11.93□□□□□ -0.5
RIM101P33400 YFH7YFR007W 1062 nt11.93□□□□□ -0.5
RIM101P33400 ARI1YGL157W 1044 nt11.93□□□□□ -0.5
RIM101P33400 BDH2YAL061W 1254 nt11.93□□□□□ -0.5
RIM101P33400 ALG12YNR030W 1656 nt11.93□□□□□ -0.5
RIM101P33400 HER2YMR293C 1395 nt11.92□□□□□ -0.5
RIM101P33400 MRP13YGR084C 1020 nt11.92□□□□□ -0.5
RIM101P33400 DCG1YIR030C 735 nt11.91□□□□□ -0.5
RIM101P33400 RRI1YDL216C 1323 nt11.89□□□□□ -0.51
RIM101P33400 tR(ACG)Q2tR(ACG)Q2 74 nt11.89□□□□□ -0.51
RIM101P33400 CSG2YBR036C 1233 nt11.89□□□□□ -0.51
RIM101P33400 EHD3YDR036C 1503 nt11.89□□□□□ -0.51
RIM101P33400 PIB1YDR313C 861 nt11.88□□□□□ -0.51
RIM101P33400 YGL218WYGL218W 651 nt11.88□□□□□ -0.51
RIM101P33400 YHR140WYHR140W 720 nt11.88□□□□□ -0.51
RIM101P33400 CUE1YMR264W 612 nt11.88□□□□□ -0.51
RIM101P33400 BUD21YOR078W 645 nt11.88□□□□□ -0.51
RIM101P33400 HSP60YLR259C 1719 nt11.88□□□□□ -0.51
RIM101P33400 WHI4YDL224C 1950 nt11.87□□□□□ -0.51
RIM101P33400 POP6YGR030C 477 nt11.87□□□□□ -0.51
RIM101P33400 FMT1YBL013W 1206 nt11.87□□□□□ -0.51
RIM101P33400 YCR016WYCR016W 873 nt11.86□□□□□ -0.51
RIM101P33400 LUC7YDL087C 786 nt11.86□□□□□ -0.51
RIM101P33400 MTQ2YDR140W 666 nt11.86□□□□□ -0.51
RIM101P33400 CCT6YDR188W 1641 nt11.86□□□□□ -0.51
RIM101P33400 TVP23YDR084C 600 nt11.85□□□□□ -0.51
RIM101P33400 YSC83YHR017W 1158 nt11.85□□□□□ -0.51
RIM101P33400 YJL047C-AYJL047C-A 135 nt11.85□□□□□ -0.51
RIM101P33400 CMS1YLR003C 876 nt11.85□□□□□ -0.51
RIM101P33400 YBR027CYBR027C 333 nt11.85□□□□□ -0.51
RIM101P33400 CBP6YBR120C 489 nt11.85□□□□□ -0.51
RIM101P33400 MCM21YDR318W 1107 nt11.84□□□□□ -0.51
RIM101P33400 MRPL15YLR312W-A 762 nt11.84□□□□□ -0.51
RIM101P33400 MDM12YOL009C 816 nt11.84□□□□□ -0.51
RIM101P33400 YOL050CYOL050C 321 nt11.84□□□□□ -0.51
RIM101P33400 OST3YOR085W 1053 nt11.84□□□□□ -0.51
RIM101P33400 STE4YOR212W 1272 nt11.84□□□□□ -0.51
RIM101P33400 YCR102CYCR102C 1107 nt11.83□□□□□ -0.52
RIM101P33400 PCL9YDL179W 915 nt11.83□□□□□ -0.52
RIM101P33400 PUS2YGL063W 1113 nt11.83□□□□□ -0.52
RIM101P33400 MRPL49YJL096W 486 nt11.83□□□□□ -0.52
RIM101P33400 ERG20YJL167W 1059 nt11.83□□□□□ -0.52
RIM101P33400 YPL277CYPL277C 1464 nt11.83□□□□□ -0.52
RIM101P33400 HYM1YKL189W 1200 nt11.82□□□□□ -0.52
RIM101P33400 MUM3YOR298W 1440 nt11.82□□□□□ -0.52
RIM101P33400 RPI1YIL119C 1224 nt11.81□□□□□ -0.52
RIM101P33400 TRM9YML014W 840 nt11.81□□□□□ -0.52
RIM101P33400 GPI18YBR004C 1302 nt11.81□□□□□ -0.52
RIM101P33400 LSM3YLR438C-A 270 nt11.8□□□□□ -0.52
RIM101P33400 PPA2YMR267W 933 nt11.8□□□□□ -0.52
RIM101P33400 YNL195CYNL195C 786 nt11.8□□□□□ -0.52
RIM101P33400 PAF1YBR279W 1338 nt11.8□□□□□ -0.52
RIM101P33400 OMS1YDR316W 1416 nt11.79□□□□□ -0.52
RIM101P33400 MTC7YEL033W 420 nt11.79□□□□□ -0.52
RIM101P33400 YHL045WYHL045W 348 nt11.79□□□□□ -0.52
RIM101P33400 VMA6YLR447C 1038 nt11.79□□□□□ -0.52
RIM101P33400 YOR020W-AYOR020W-A 273 nt11.79□□□□□ -0.52
RIM101P33400 RDN37-1RDN37-1 5354 nt11.79□□□□□ -0.52
RIM101P33400 RDN37-2RDN37-2 5354 nt11.79□□□□□ -0.52
RIM101P33400 DRN1YGR093W 1524 nt11.78□□□□□ -0.52
RIM101P33400 ADE1YAR015W 921 nt11.78□□□□□ -0.52
RIM101P33400 YLR281CYLR281C 468 nt11.78□□□□□ -0.52
RIM101P33400 SLD7YOR060C 774 nt11.78□□□□□ -0.52
RIM101P33400 YDR222WYDR222W 1248 nt11.77□□□□□ -0.53
RIM101P33400 XPT1YJR133W 630 nt11.77□□□□□ -0.53
RIM101P33400 YKR051WYKR051W 1257 nt11.77□□□□□ -0.53
RIM101P33400 VPS68YOL129W 555 nt11.77□□□□□ -0.53
RIM101P33400 YHR175W-AYHR175W-A 150 nt11.76□□□□□ -0.53
RIM101P33400 PET9YBL030C 957 nt11.76□□□□□ -0.53
RIM101P33400 RNH1YMR234W 1047 nt11.76□□□□□ -0.53
RIM101P33400 YNL217WYNL217W 981 nt11.76□□□□□ -0.53
RIM101P33400 LOA1YPR139C 903 nt11.76□□□□□ -0.53
RIM101P33400 CHL4YDR254W 1377 nt11.76□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms