Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 SUV3YPL029W 2214 nt12.87□□□□□ -0.35
TY1B-PR3P0C2J1 YLR358CYLR358C 564 nt12.85□□□□□ -0.35
TY1B-PR3P0C2J1 TAD2YJL035C 753 nt12.84□□□□□ -0.35
TY1B-PR3P0C2J1 CCT2YIL142W 1584 nt12.83□□□□□ -0.36
TY1B-PR3P0C2J1 NUP53YMR153W 1428 nt12.83□□□□□ -0.36
TY1B-PR3P0C2J1 ITR2YOL103W 1830 nt12.83□□□□□ -0.36
TY1B-PR3P0C2J1 OPI10YOL032W 741 nt12.82□□□□□ -0.36
TY1B-PR3P0C2J1 MFT1YML062C 1179 nt12.81□□□□□ -0.36
TY1B-PR3P0C2J1 SBP1YHL034C 885 nt12.8□□□□□ -0.36
TY1B-PR3P0C2J1 YAT1YAR035W 2064 nt12.8□□□□□ -0.36
TY1B-PR3P0C2J1 RPS6AYPL090C 711 nt12.79□□□□□ -0.36
TY1B-PR3P0C2J1 RPS6BYBR181C 711 nt12.79□□□□□ -0.36
TY1B-PR3P0C2J1 YER156CYER156C 1017 nt12.77□□□□□ -0.36
TY1B-PR3P0C2J1 TDH1YJL052W 999 nt12.77□□□□□ -0.36
TY1B-PR3P0C2J1 BXI1YNL305C 894 nt12.76□□□□□ -0.37
TY1B-PR3P0C2J1 YOR325WYOR325W 474 nt12.76□□□□□ -0.37
TY1B-PR3P0C2J1 NCA3YJL116C 1014 nt12.76□□□□□ -0.37
TY1B-PR3P0C2J1 KEL3YPL263C 1956 nt12.75□□□□□ -0.37
TY1B-PR3P0C2J1 ENT4YLL038C 744 nt12.75□□□□□ -0.37
TY1B-PR3P0C2J1 PBP1YGR178C 2169 nt12.75□□□□□ -0.37
TY1B-PR3P0C2J1 CRC1YOR100C 984 nt12.74□□□□□ -0.37
TY1B-PR3P0C2J1 LSR1LSR1 1175 nt12.72□□□□□ -0.37
TY1B-PR3P0C2J1 VMA11YPL234C 495 nt12.72□□□□□ -0.37
TY1B-PR3P0C2J1 HAP5YOR358W 729 nt12.71□□□□□ -0.37
TY1B-PR3P0C2J1 RIM2YBR192W 1134 nt12.71□□□□□ -0.37
TY1B-PR3P0C2J1 HAC1YFL031W 717 nt12.7□□□□□ -0.38
TY1B-PR3P0C2J1 YIL168WYIL168W 384 nt12.7□□□□□ -0.38
TY1B-PR3P0C2J1 SRY1YKL218C 981 nt12.7□□□□□ -0.38
TY1B-PR3P0C2J1 SAN1YDR143C 1833 nt12.7□□□□□ -0.38
TY1B-PR3P0C2J1 YIL100C-AYIL100C-A 339 nt12.69□□□□□ -0.38
TY1B-PR3P0C2J1 PTC6YCR079W 1329 nt12.69□□□□□ -0.38
TY1B-PR3P0C2J1 YPT11YNL304W 1254 nt12.69□□□□□ -0.38
TY1B-PR3P0C2J1 DLD3YEL071W 1491 nt12.68□□□□□ -0.38
TY1B-PR3P0C2J1 YMR265CYMR265C 1386 nt12.66□□□□□ -0.38
TY1B-PR3P0C2J1 ILV3YJR016C 1758 nt12.66□□□□□ -0.38
TY1B-PR3P0C2J1 RRT6YGL146C 936 nt12.66□□□□□ -0.38
TY1B-PR3P0C2J1 KGD2YDR148C 1392 nt12.64□□□□□ -0.39
TY1B-PR3P0C2J1 YPR084WYPR084W 1371 nt12.64□□□□□ -0.39
TY1B-PR3P0C2J1 RPR1RPR1 369 nt12.64□□□□□ -0.39
TY1B-PR3P0C2J1 NAR1YNL240C 1476 nt12.61□□□□□ -0.39
TY1B-PR3P0C2J1 CAK1YFL029C 1107 nt12.61□□□□□ -0.39
TY1B-PR3P0C2J1 SPG1YGR236C 288 nt12.6□□□□□ -0.39
TY1B-PR3P0C2J1 MET22YOL064C 1074 nt12.6□□□□□ -0.39
TY1B-PR3P0C2J1 snR31snR31 225 nt12.6□□□□□ -0.39
TY1B-PR3P0C2J1 OCH1YGL038C 1443 nt12.6□□□□□ -0.39
TY1B-PR3P0C2J1 YFR020WYFR020W 699 nt12.59□□□□□ -0.39
TY1B-PR3P0C2J1 YML079WYML079W 606 nt12.59□□□□□ -0.39
TY1B-PR3P0C2J1 YBL095WYBL095W 813 nt12.58□□□□□ -0.39
TY1B-PR3P0C2J1 URA1YKL216W 945 nt12.55□□□□□ -0.4
TY1B-PR3P0C2J1 RRT14YIL127C 621 nt12.53□□□□□ -0.4
TY1B-PR3P0C2J1 RSM7YJR113C 744 nt12.52□□□□□ -0.41
TY1B-PR3P0C2J1 GAS1YMR307W 1680 nt12.52□□□□□ -0.41
TY1B-PR3P0C2J1 YHR219WYHR219W 1875 nt12.5□□□□□ -0.41
TY1B-PR3P0C2J1 PUP2YGR253C 783 nt12.5□□□□□ -0.41
TY1B-PR3P0C2J1 CHS7YHR142W 951 nt12.5□□□□□ -0.41
TY1B-PR3P0C2J1 SHC1YER096W 1539 nt12.5□□□□□ -0.41
TY1B-PR3P0C2J1 CYT2YKL087C 675 nt12.48□□□□□ -0.41
TY1B-PR3P0C2J1 MRS6YOR370C 1812 nt12.47□□□□□ -0.41
TY1B-PR3P0C2J1 SNX3YOR357C 489 nt12.47□□□□□ -0.41
TY1B-PR3P0C2J1 GID8YMR135C 1368 nt12.47□□□□□ -0.41
TY1B-PR3P0C2J1 RPN14YGL004C 1254 nt12.46□□□□□ -0.42
TY1B-PR3P0C2J1 RPC82YPR190C 1965 nt12.46□□□□□ -0.42
TY1B-PR3P0C2J1 RDN25-1RDN25-1 3396 nt12.44□□□□□ -0.42
TY1B-PR3P0C2J1 RDN25-2RDN25-2 3396 nt12.44□□□□□ -0.42
TY1B-PR3P0C2J1 CYS3YAL012W 1185 nt12.43□□□□□ -0.42
TY1B-PR3P0C2J1 APT1YML022W 564 nt12.43□□□□□ -0.42
TY1B-PR3P0C2J1 YJL144WYJL144W 315 nt12.42□□□□□ -0.42
TY1B-PR3P0C2J1 YLR460CYLR460C 1131 nt12.41□□□□□ -0.42
TY1B-PR3P0C2J1 ALG12YNR030W 1656 nt12.41□□□□□ -0.42
TY1B-PR3P0C2J1 YKL133CYKL133C 1392 nt12.41□□□□□ -0.42
TY1B-PR3P0C2J1 PIH1YHR034C 1035 nt12.41□□□□□ -0.42
TY1B-PR3P0C2J1 YDR476CYDR476C 675 nt12.38□□□□□ -0.43
TY1B-PR3P0C2J1 YAL019W-AYAL019W-A 570 nt12.37□□□□□ -0.43
TY1B-PR3P0C2J1 INA1YLR413W 2028 nt12.37□□□□□ -0.43
TY1B-PR3P0C2J1 YOR111WYOR111W 699 nt12.36□□□□□ -0.43
TY1B-PR3P0C2J1 RHO1YPR165W 630 nt12.36□□□□□ -0.43
TY1B-PR3P0C2J1 YPT31YER031C 672 nt12.35□□□□□ -0.43
TY1B-PR3P0C2J1 MAS2YHR024C 1449 nt12.35□□□□□ -0.43
TY1B-PR3P0C2J1 YHL030W-AYHL030W-A 462 nt12.35□□□□□ -0.43
TY1B-PR3P0C2J1 NVJ2YPR091C 2313 nt12.34□□□□□ -0.43
TY1B-PR3P0C2J1 PDC6YGR087C 1692 nt12.34□□□□□ -0.43
TY1B-PR3P0C2J1 SPR1YOR190W 1338 nt12.34□□□□□ -0.43
TY1B-PR3P0C2J1 ARO8YGL202W 1503 nt12.32□□□□□ -0.44
TY1B-PR3P0C2J1 UME1YPL139C 1383 nt12.32□□□□□ -0.44
TY1B-PR3P0C2J1 RNA170RNA170 169 nt12.32□□□□□ -0.44
TY1B-PR3P0C2J1 SLM3YDL033C 1254 nt12.31□□□□□ -0.44
TY1B-PR3P0C2J1 LAT1YNL071W 1449 nt12.3□□□□□ -0.44
TY1B-PR3P0C2J1 DOC1YGL240W 753 nt12.29□□□□□ -0.44
TY1B-PR3P0C2J1 ATP23YNR020C 813 nt12.29□□□□□ -0.44
TY1B-PR3P0C2J1 KES1YPL145C 1305 nt12.28□□□□□ -0.44
TY1B-PR3P0C2J1 PUS4YNL292W 1212 nt12.27□□□□□ -0.45
TY1B-PR3P0C2J1 ESBP6YNL125C 2022 nt12.26□□□□□ -0.45
TY1B-PR3P0C2J1 SPE3YPR069C 882 nt12.25□□□□□ -0.45
TY1B-PR3P0C2J1 YOX1YML027W 1158 nt12.25□□□□□ -0.45
TY1B-PR3P0C2J1 YMR316C-BYMR316C-B 309 nt12.25□□□□□ -0.45
TY1B-PR3P0C2J1 ATP2YJR121W 1536 nt12.25□□□□□ -0.45
TY1B-PR3P0C2J1 THI3YDL080C 1830 nt12.24□□□□□ -0.45
TY1B-PR3P0C2J1 THI73YLR004C 1572 nt12.24□□□□□ -0.45
TY1B-PR3P0C2J1 PSP2YML017W 1782 nt12.22□□□□□ -0.45
TY1B-PR3P0C2J1 PNS1YOR161C 1620 nt12.22□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms