Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL445423.1-201ENST00000609941 536 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC004223.4-201ENST00000612426 332 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 MT-TH-201ENST00000387441 69 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 SNORA26.8-201ENST00000391306 124 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 VDAC2P1-201ENST00000399358 958 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 ARF1P1-201ENST00000406466 544 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 FTH1P26-201ENST00000406512 701 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AL034372.1-201ENST00000407586 754 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 OFD1P18Y-201ENST00000420889 959 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AL109913.1-201ENST00000421173 514 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 MRPS36P1-201ENST00000421291 307 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 FKBP1AP3-201ENST00000423650 319 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC091874.2-201ENST00000505889 720 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC124891.1-201ENST00000536322 519 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AP006296.1-201ENST00000537438 499 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 OR11J5P-201ENST00000556889 934 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 ZNF519P2-201ENST00000557032 169 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC079171.1-201ENST00000568788 914 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC134669.1-201ENST00000581275 672 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC007952.7-201ENST00000583141 757 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC026150.3-201ENST00000602595 499 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC090186.1-201ENST00000605991 572 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC104117.5-201ENST00000606195 547 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 RBM22P4-201ENST00000613117 1240 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AC073429.2-201ENST00000569694 1444 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 AF228730.7-203ENST00000641436 1804 ntBASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUEDC1Q9NWM3 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC013444.1-201ENST00000428909 1904 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC145207.5-201ENST00000582866 2682 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms