Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 GTF2F2P2-201ENST00000445825 721 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 RPL24P8-201ENST00000446071 474 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AL451074.4-201ENST00000447545 470 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AL390728.3-201ENST00000452704 270 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX3Q99909 AC013787.1-201ENST00000460165 307 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 MRPL49P1-201ENST00000505951 535 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX3Q99909 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 RN7SKP242-201ENST00000515967 289 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AP001994.1-201ENST00000527539 826 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX3Q99909 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX3Q99909 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX3Q99909 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX3Q99909 AL390058.1-201ENST00000603834 629 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AC013731.1-201ENST00000604340 883 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AL451085.1-201ENST00000604546 690 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX3Q99909 MIR7162-201ENST00000611134 69 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX3Q99909 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX3Q99909 AC243830.2-201ENST00000618067 630 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AC073488.8-201ENST00000631952 757 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
SSX3Q99909 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 AL359694.2-201ENST00000567753 1615 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SSX3Q99909 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SSX3Q99909 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX3Q99909 AL157713.1-201ENST00000379752 1531 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX3Q99909 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX3Q99909 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 AL117378.2-201ENST00000622916 1337 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSX3Q99909 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX3Q99909 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX3Q99909 RNA5SP260-201ENST00000363849 111 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX3Q99909 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SSX3Q99909 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX3Q99909 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX3Q99909 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX3Q99909 AC013268.2-201ENST00000420753 337 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 RPSAP1-201ENST00000421328 880 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 OR5P4P-201ENST00000424698 917 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 VN1R35P-201ENST00000428102 693 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 VDAC2P3-201ENST00000430995 828 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 FECHP1-201ENST00000431896 1214 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 NPM1P48-201ENST00000436002 853 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 AC234771.3-201ENST00000454984 622 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 RPL12P40-201ENST00000467028 488 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX3Q99909 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX3Q99909 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 AC087257.2-201ENST00000538759 928 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX3Q99909 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX3Q99909 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX3Q99909 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX3Q99909 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 RN7SL657P-201ENST00000582431 293 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 AL035417.2-201ENST00000603887 796 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 AP003072.5-201ENST00000623872 773 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 AL391380.1-201ENST00000439300 1432 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.04□□□□□ -1.44
SSX3Q99909 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX3Q99909 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX3Q99909 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX3Q99909 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX3Q99909 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms