Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RNU6-1017P-201ENST00000363613 106 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 MIR541-201ENST00000401360 84 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RN7SKP225-201ENST00000410405 352 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC020983.1-201ENST00000417063 543 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC073900.1-201ENST00000429766 776 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AL731892.1-201ENST00000437364 1192 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RPL24P8-201ENST00000446071 474 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC009963.4-201ENST00000448535 339 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 DBIL5P-202ENST00000453414 250 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC117395.2-201ENST00000463122 1128 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RN7SL571P-201ENST00000468302 295 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RN7SL797P-201ENST00000486314 297 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RN7SL124P-201ENST00000498656 285 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC008496.1-201ENST00000509131 295 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 LINC01085-203ENST00000511195 326 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC005479.1-201ENST00000554629 451 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC093524.1-201ENST00000564266 1094 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RN7SL835P-201ENST00000579920 262 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC015818.6-201ENST00000584274 634 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 RPL35AP25-201ENST00000584631 330 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC025171.4-201ENST00000607250 1047 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC104184.1-201ENST00000607513 721 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 MIR6872-201ENST00000612981 62 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 MIR6761-201ENST00000617899 72 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 MIR6754-201ENST00000621121 66 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 uc_338.21-201ENST00000622458 147 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC034229.6-201ENST00000623704 224 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 GAS2-210ENST00000630668 674 ntTSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AL590396.3-201ENST00000636334 300 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC068205.4-201ENST00000637880 804 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 AC020656.2-201ENST00000613291 5309 ntBASIC5.2□□□□□ -1.58
AP1S3Q96PC3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP1S3Q96PC3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 AC006116.1-201ENST00000587908 2171 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 MAPK10-357ENST00000641831 2858 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 RPL12P13-201ENST00000310055 497 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 RN7SKP63-201ENST00000363187 301 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 RNA5SP263-201ENST00000363376 128 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 RN7SKP36-201ENST00000363997 312 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP1S3Q96PC3 AC133644.1-201ENST00000398171 937 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 RN7SKP131-201ENST00000410698 301 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 CTSLP8-201ENST00000413075 967 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 CRIP1P3-201ENST00000416794 220 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 GNAI2P2-201ENST00000417003 916 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 RBMY2YP-201ENST00000423333 912 ntBASIC5.19□□□□□ -1.58
AP1S3Q96PC3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms