Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 OFD1P10Y-201ENST00000434110 1433 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 RPS7P12-201ENST00000422385 582 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 COL11A2P1-205ENST00000441798 676 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 CCNJP1-201ENST00000450600 1149 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AC106785.4-201ENST00000569492 412 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AC025283.1-201ENST00000572039 734 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AC244100.4-201ENST00000617747 388 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 MIR6503-201ENST00000622884 86 ntBASIC10.57□□□□□ -0.72
VPS8Q8N3P4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS8Q8N3P4 AC062029.1-202ENST00000606164 3651 ntBASIC10.56□□□□□ -0.72
VPS8Q8N3P4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 AC007012.2-201ENST00000623206 1676 ntBASIC10.56□□□□□ -0.72
VPS8Q8N3P4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 RNA5SP140-201ENST00000364524 92 ntBASIC10.56□□□□□ -0.72
VPS8Q8N3P4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 MRPS21P5-201ENST00000417885 231 ntBASIC10.56□□□□□ -0.72
VPS8Q8N3P4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS8Q8N3P4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 MAPK10-383ENST00000642032 3390 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 SNORA64.3-201ENST00000365647 134 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 AL034417.1-201ENST00000399343 800 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 AL596268.1-201ENST00000427910 1048 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 RPL12P49-201ENST00000441100 121 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 AC099670.1-201ENST00000455141 783 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 ANP32BP1-202ENST00000568553 737 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 AC004805.3-201ENST00000603178 310 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 Six3os1_4.1-201ENST00000615706 324 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 MIR6813-201ENST00000621638 56 ntBASIC10.55□□□□□ -0.72
VPS8Q8N3P4 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VPS8Q8N3P4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS8Q8N3P4 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms