Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AL358913.2-201ENST00000553881 1548 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AL590762.1-201ENST00000391782 432 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC090114.1-201ENST00000393266 448 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 RPL7P58-201ENST00000402913 758 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 NIP7P1-201ENST00000433227 512 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 PCMTD1P3-201ENST00000451824 472 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC115223.1-201ENST00000466377 870 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SL160P-201ENST00000468558 284 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SL392P-201ENST00000473024 299 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AL928654.1-201ENST00000476081 354 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 HNRNPA1P17-201ENST00000496620 924 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AP004607.6-201ENST00000525033 1202 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 FRG2IP-201ENST00000563581 781 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC012640.3-201ENST00000607847 430 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 MIR6737-201ENST00000617385 70 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 pRNA.9-201ENST00000618609 89 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC183089.2-201ENST00000637931 916 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 OR7E161P-202ENST00000641994 1033 ntBASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 LARS-212ENST00000510191 3737 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DRB4X5D2U9 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 AC010168.2-201ENST00000562691 5428 ntBASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 AC112243.1-201ENST00000623949 3851 ntBASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 RNA5SP472-201ENST00000363868 119 ntBASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SKP107-201ENST00000364157 290 ntBASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SKP62-201ENST00000384539 329 ntBASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 CLCN3P1-201ENST00000423965 1017 ntBASIC5.29□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms