Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AC090236.2-201ENST00000587933 1101 ntBASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AP002884.5-201ENST00000595053 1132 ntBASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AC048380.2-201ENST00000624725 3548 ntBASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC10.52□□□□□ -0.72
RIMBP3Q9UFD9 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC10.52□□□□□ -0.72
RIMBP3Q9UFD9 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RIMBP3Q9UFD9 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC10.52□□□□□ -0.72
RIMBP3Q9UFD9 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
RIMBP3Q9UFD9 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RIMBP3Q9UFD9 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 ASTN1-202ENST00000361833 7116 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AL807761.1-201ENST00000417622 171 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC093155.2-201ENST00000420734 937 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 EIF4A1P6-201ENST00000448133 1210 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC002553.3-201ENST00000453002 341 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 RPL35AP28-201ENST00000459730 331 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC091153.1-201ENST00000466297 402 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 RPL10P14-201ENST00000565265 298 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 RN7SL475P-201ENST00000583379 298 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC068870.2-201ENST00000620635 389 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC020658.2-201ENST00000559030 4020 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 OFD1P15Y-201ENST00000411536 1392 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AC027279.4-201ENST00000624371 2072 ntBASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RIMBP3Q9UFD9 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 AL645927.1-201ENST00000396783 406 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 LINC02495-203ENST00000636704 242 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 AC116667.2-201ENST00000641075 823 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 EEF1A1P14-201ENST00000421195 1376 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 DPY19L2P2-203ENST00000435536 1858 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 RPS12P17-201ENST00000438591 377 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 RPL12P3-201ENST00000440080 396 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 HBG2-204ENST00000444587 307 ntTSL 2 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 AC096743.1-201ENST00000485172 319 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 ZNF322P1-201ENST00000568013 1209 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 TSHZ2-205ENST00000626626 670 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms