Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 AC005828.7-201ENST00000607331 556 ntBASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 AL163051.2-201ENST00000618976 735 ntBASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 SAMMSON-222ENST00000641901 2727 ntBASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 HDAC1P1-201ENST00000455482 1445 ntBASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 WNK1-220ENST00000574564 1401 ntBASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 WASF5P-205ENST00000428639 1455 ntBASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PPARGC1AQ9UBK2 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AP003471.1-202ENST00000319051 1988 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 MIR1231-201ENST00000408101 92 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 SETP22-201ENST00000412243 957 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 NFU1P1-201ENST00000413128 774 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC009413.1-201ENST00000414823 399 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 MRPS33P4-201ENST00000434892 317 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 MTATP6P26-201ENST00000445926 662 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC096922.1-201ENST00000461635 651 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 RPS3AP6-201ENST00000484430 795 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 RNU6-964P-201ENST00000516524 69 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 Y_RNA.717-201ENST00000517106 92 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 RN7SL366P-201ENST00000577957 292 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 RN7SL178P-201ENST00000582930 304 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC112220.2-201ENST00000605513 533 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC073111.2-201ENST00000605657 1075 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC006946.3-201ENST00000609791 756 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC068787.1-201ENST00000623908 691 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC130448.2-201ENST00000624082 374 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AC099654.9-201ENST00000637055 678 ntBASIC7.65□□□□□ -1.18
PPARGC1AQ9UBK2 AL590065.1-201ENST00000603371 4774 ntBASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
PPARGC1AQ9UBK2 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC005614.1-201ENST00000598952 3653 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 NF1P8-201ENST00000415351 1461 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 PPIAP22-201ENST00000358455 498 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 SNORA73B-201ENST00000363217 204 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms