Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NDUFA8P1-201ENST00000605525 367 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC010538.1-201ENST00000615131 663 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 FAM74A6-203ENST00000615956 481 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 MIR6736-201ENST00000616799 59 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LINC01170-202ENST00000628324 650 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 MIR3191-201ENST00000636300 76 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC087565.3-203ENST00000641018 837 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 USP46-207ENST00000508499 1419 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 MTCO1P25-201ENST00000414449 1799 ntBASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
CUEDC1Q9NWM3 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 ZNF833P-201ENST00000424938 1494 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC009053.1-202ENST00000563377 2051 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC135731.2-201ENST00000603029 2098 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 SNORA72.1-201ENST00000363485 129 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RNU6-236P-201ENST00000363886 106 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RNU4-51P-201ENST00000364206 140 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RCL1-201ENST00000381728 758 ntTSL 3 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RNU6-481P-201ENST00000384194 107 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RN7SKP33-201ENST00000410942 340 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 NAP1L4P2-201ENST00000425958 899 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 MTND1P32-201ENST00000433043 938 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 CICP10-201ENST00000439497 198 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 MTCO3P18-201ENST00000440206 761 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 HMGB3P6-201ENST00000444896 598 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 EEF1E1P1-201ENST00000446998 430 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 OR7E102P-201ENST00000448855 1015 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC092634.4-203ENST00000451395 448 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 RPL37P25-201ENST00000507308 276 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 IGKV2OR22-4-201ENST00000523309 367 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 NTAN1P3-201ENST00000535885 715 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC013452.1-201ENST00000560630 598 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 GARSP1-201ENST00000570895 719 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 CLPTM1LP1-201ENST00000604519 484 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AC069545.1-201ENST00000605671 358 ntBASIC8.27□□□□□ -1.09
CUEDC1Q9NWM3 AL121655.1-201ENST00000605811 308 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms