Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 BCO1-201ENST00000258168 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC126474.2-201ENST00000623268 1750 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 CCAT2-201ENST00000630920 1752 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 ELOB-201ENST00000262306 582 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 RN7SKP10-201ENST00000364291 325 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 Y_RNA.380-201ENST00000365663 111 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 RNU6-417P-201ENST00000384712 107 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 U8.14-201ENST00000390843 143 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SPA17P1-201ENST00000416656 452 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 HMGB3P10-201ENST00000434734 572 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 HSPD1P21-201ENST00000436541 245 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 RPL7P29-201ENST00000437151 728 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 RPL21P2-201ENST00000440049 481 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 RPL29P7-201ENST00000440227 457 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AL445189.2-201ENST00000447543 259 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC110994.1-201ENST00000468519 406 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC087808.1-201ENST00000520501 361 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 MIR98-201ENST00000606724 119 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AL161734.1-201ENST00000609720 557 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 AC073107.2-201ENST00000620476 238 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 PLCE1P1-201ENST00000622094 305 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SART3-202ENST00000431469 2834 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 FAM173B-201ENST00000280330 1928 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 C1orf226-203ENST00000458626 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 MYEF2-216ENST00000616409 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 EEF1A1P2-201ENST00000553854 1447 ntBASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 DNHD1-202ENST00000354685 3205 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SLA-202ENST00000395352 2102 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 RNLS-202ENST00000371947 3385 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 DHX37-206ENST00000544745 4112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC10.48□□□□□ -0.73
CHRDL2Q6WN34 PAX8-201ENST00000263334 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 PLAC8-203ENST00000426923 2253 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 ACSL1-204ENST00000504342 2333 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 CD22-204ENST00000536635 3004 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 DLGAP4-213ENST00000489701 2396 ntTSL 2 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 INTS9-211ENST00000521022 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 TOP3A-201ENST00000321105 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 PCDHGA1-201ENST00000378105 4069 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 GPATCH4-201ENST00000368232 1972 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 MYO1C-204ENST00000545534 3676 ntTSL 2 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 OFCC1-201ENST00000316020 863 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 Y_RNA.222-201ENST00000364264 102 ntBASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 Y_RNA.376-201ENST00000365638 108 ntBASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 PILRA-203ENST00000394000 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 RPL21P1-201ENST00000399532 476 ntBASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 RN7SKP152-201ENST00000410444 315 ntBASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 Y_RNA.608-201ENST00000410647 95 ntBASIC10.47□□□□□ -0.73
CHRDL2Q6WN34 RN7SKP39-201ENST00000410773 322 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms