Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
RPL39P62891 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPL39P62891 OR2T4-202ENST00000366475 1047 ntBASIC4.8□□□□□ -1.64
RPL39P62891 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 MIR181C-201ENST00000384881 110 ntBASIC4.8□□□□□ -1.64
RPL39P62891 RPSAP42-201ENST00000403415 878 ntBASIC4.8□□□□□ -1.64
RPL39P62891 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC4.8□□□□□ -1.64
RPL39P62891 RN7SKP168-201ENST00000410910 300 ntBASIC4.8□□□□□ -1.64
RPL39P62891 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 FAF2P1-201ENST00000429974 1298 ntBASIC4.8□□□□□ -1.64
RPL39P62891 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC4.8□□□□□ -1.64
RPL39P62891 AC002553.1-201ENST00000442828 802 ntBASIC4.8□□□□□ -1.64
RPL39P62891 CYCSP44-201ENST00000448560 313 ntBASIC4.8□□□□□ -1.64
RPL39P62891 SULT1D1P-201ENST00000458020 882 ntBASIC4.8□□□□□ -1.64
RPL39P62891 RN7SL688P-201ENST00000471754 275 ntBASIC4.8□□□□□ -1.64
RPL39P62891 RN7SL382P-201ENST00000482631 282 ntBASIC4.8□□□□□ -1.64
RPL39P62891 RN7SL152P-201ENST00000484176 298 ntBASIC4.8□□□□□ -1.64
RPL39P62891 MTND6P8-201ENST00000503471 522 ntBASIC4.8□□□□□ -1.64
RPL39P62891 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC4.8□□□□□ -1.64
RPL39P62891 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 EGLN3P1-201ENST00000541727 720 ntBASIC4.8□□□□□ -1.64
RPL39P62891 SOX5-213ENST00000541847 758 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC4.8□□□□□ -1.64
RPL39P62891 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC4.8□□□□□ -1.64
RPL39P62891 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC4.8□□□□□ -1.64
RPL39P62891 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 OR7E94P-202ENST00000601375 790 ntBASIC4.8□□□□□ -1.64
RPL39P62891 AC010333.3-201ENST00000615100 402 ntBASIC4.8□□□□□ -1.64
RPL39P62891 MIR6723-201ENST00000621981 89 ntBASIC4.8□□□□□ -1.64
RPL39P62891 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.8□□□□□ -1.64
RPL39P62891 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
RPL39P62891 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC4.8□□□□□ -1.64
RPL39P62891 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 AL355377.1-201ENST00000621125 1653 ntBASIC4.8□□□□□ -1.64
RPL39P62891 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 AC079949.2-201ENST00000617117 2933 ntBASIC4.79□□□□□ -1.64
RPL39P62891 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 MFSD8-256ENST00000641949 1640 ntBASIC4.79□□□□□ -1.64
RPL39P62891 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPL39P62891 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.79□□□□□ -1.64
RPL39P62891 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC4.79□□□□□ -1.64
RPL39P62891 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC4.79□□□□□ -1.64
RPL39P62891 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 AC073365.1-203ENST00000641055 1992 ntBASIC4.79□□□□□ -1.64
RPL39P62891 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 ARMCX7P-201ENST00000372828 562 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AL451142.1-201ENST00000375867 775 ntBASIC4.79□□□□□ -1.64
RPL39P62891 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPL39P62891 SNORD15A-201ENST00000384214 148 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC4.79□□□□□ -1.64
RPL39P62891 TAS2R2P-201ENST00000421146 910 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC4.79□□□□□ -1.64
RPL39P62891 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPL39P62891 ATP5G1P5-201ENST00000429024 411 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC4.79□□□□□ -1.64
RPL39P62891 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC4.79□□□□□ -1.64
RPL39P62891 AL161626.1-201ENST00000441480 490 ntBASIC4.79□□□□□ -1.64
RPL39P62891 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC4.79□□□□□ -1.64
RPL39P62891 RPSAP49-201ENST00000445182 886 ntBASIC4.79□□□□□ -1.64
RPL39P62891 GTF2F2P2-201ENST00000445825 721 ntBASIC4.79□□□□□ -1.64
RPL39P62891 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC4.79□□□□□ -1.64
RPL39P62891 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.79□□□□□ -1.64
RPL39P62891 AL139156.3-201ENST00000454802 394 ntBASIC4.79□□□□□ -1.64
RPL39P62891 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 PABPC1P10-201ENST00000464731 381 ntBASIC4.79□□□□□ -1.64
RPL39P62891 TAAR3P-201ENST00000466706 1078 ntBASIC4.79□□□□□ -1.64
RPL39P62891 RN7SL58P-201ENST00000473445 294 ntBASIC4.79□□□□□ -1.64
RPL39P62891 RN7SL306P-201ENST00000492941 296 ntBASIC4.79□□□□□ -1.64
RPL39P62891 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC4.79□□□□□ -1.64
RPL39P62891 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC4.79□□□□□ -1.64
RPL39P62891 SCARNA6-201ENST00000515982 265 ntBASIC4.79□□□□□ -1.64
RPL39P62891 KCTD9P4-201ENST00000526766 1166 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 AC087257.2-201ENST00000538759 928 ntBASIC4.79□□□□□ -1.64
RPL39P62891 ATP5J2P4-201ENST00000538774 267 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPL39P62891 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms