Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC4.93□□□□□ -1.62
CKS1BP61024 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC4.93□□□□□ -1.62
CKS1BP61024 TXNP4-201ENST00000575018 310 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC4.93□□□□□ -1.62
CKS1BP61024 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC4.93□□□□□ -1.62
CKS1BP61024 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC4.93□□□□□ -1.62
CKS1BP61024 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC4.93□□□□□ -1.62
CKS1BP61024 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC4.93□□□□□ -1.62
CKS1BP61024 AL021918.1-201ENST00000603933 236 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 AC211469.1-201ENST00000604263 394 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 AF146191.1-201ENST00000604941 889 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 AL356052.1-201ENST00000605764 376 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 BX649601.1-201ENST00000608264 572 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 CASC19-232ENST00000641480 1244 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 AC087885.1-201ENST00000641910 848 ntBASIC4.93□□□□□ -1.62
CKS1BP61024 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC4.93□□□□□ -1.62
CKS1BP61024 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.93□□□□□ -1.62
CKS1BP61024 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CKS1BP61024 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CKS1BP61024 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
CKS1BP61024 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.92□□□□□ -1.62
CKS1BP61024 RACGAP1P-201ENST00000550663 1879 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.92□□□□□ -1.62
CKS1BP61024 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC144833.1-201ENST00000567953 4089 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 MIR654-201ENST00000385199 81 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 VN2R17P-201ENST00000391712 832 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 PHBP1-201ENST00000392260 808 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 STSP1-201ENST00000412493 1151 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 GEMIN2P2-201ENST00000418195 715 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 GSTA6P-201ENST00000424144 582 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC016734.1-201ENST00000436998 654 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC092568.1-201ENST00000440950 1284 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC4.92□□□□□ -1.62
CKS1BP61024 SS18L2P1-201ENST00000445923 213 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 NUCKS1P1-201ENST00000452067 703 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 KIF3AP1-201ENST00000454055 611 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 SNX18P8-201ENST00000455120 874 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 RN7SL149P-201ENST00000465197 281 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 RN7SL505P-201ENST00000482644 293 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AL355076.1-201ENST00000484315 270 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 RN7SL635P-201ENST00000492123 296 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC233724.10-201ENST00000510454 409 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 GCSHP1-201ENST00000512554 484 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC087645.1-201ENST00000588528 291 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC018737.1-201ENST00000603900 204 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 CR589904.1-203ENST00000636515 318 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 MIR3120-201ENST00000636555 81 ntBASIC4.92□□□□□ -1.62
CKS1BP61024 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.92□□□□□ -1.62
CKS1BP61024 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CKS1BP61024 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CKS1BP61024 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.92□□□□□ -1.62
CKS1BP61024 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CKS1BP61024 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms