Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 NPM1P51-201ENST00000443470 744 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 AC106872.4-201ENST00000510050 523 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 AC079905.1-201ENST00000549280 475 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.05□□□□□ -1.12
COL4A5P29400 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 AC109309.2-201ENST00000612597 332 ntBASIC8.05□□□□□ -1.12
COL4A5P29400 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.05□□□□□ -1.12
COL4A5P29400 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL4A5P29400 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.04□□□□□ -1.12
COL4A5P29400 LYARP1-201ENST00000436977 1501 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
COL4A5P29400 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
COL4A5P29400 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.04□□□□□ -1.12
COL4A5P29400 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.04□□□□□ -1.12
COL4A5P29400 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 HSPD1P4-201ENST00000547203 1702 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
COL4A5P29400 AP001527.1-201ENST00000566440 1957 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.04□□□□□ -1.12
COL4A5P29400 AL451046.1-201ENST00000406097 534 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 CDY17P-201ENST00000414121 1282 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.04□□□□□ -1.12
COL4A5P29400 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 OR2L9P-201ENST00000444456 913 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 AC002456.2-201ENST00000509356 380 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 RNA5SP206-201ENST00000516703 121 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 CYCSP25-201ENST00000525280 316 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.04□□□□□ -1.12
COL4A5P29400 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.04□□□□□ -1.12
COL4A5P29400 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC8.04□□□□□ -1.12
COL4A5P29400 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
COL4A5P29400 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
COL4A5P29400 SPATA31C2-201ENST00000324915 3777 ntBASIC8.04□□□□□ -1.12
COL4A5P29400 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL4A5P29400 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
COL4A5P29400 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.03□□□□□ -1.12
COL4A5P29400 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 COX6B1P3-201ENST00000312310 260 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 SNORA51.9-201ENST00000384295 124 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AL355375.1-201ENST00000405686 392 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 NPM1P19-201ENST00000450070 712 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AL034399.1-201ENST00000451535 380 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.03□□□□□ -1.12
COL4A5P29400 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.03□□□□□ -1.12
COL4A5P29400 SULT1D1P-201ENST00000458020 882 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 RN7SL177P-201ENST00000476596 299 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.03□□□□□ -1.12
COL4A5P29400 RPL5P14-201ENST00000494197 878 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 LSM3P4-201ENST00000502948 309 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AC025458.1-201ENST00000506046 166 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.03□□□□□ -1.12
COL4A5P29400 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.03□□□□□ -1.12
COL4A5P29400 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 AC023827.2-201ENST00000566880 1061 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AP003115.1-201ENST00000569849 463 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 MIR6768-201ENST00000610734 72 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 AC129915.3-201ENST00000634128 948 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 AC007406.5-201ENST00000570140 3170 ntBASIC8.03□□□□□ -1.12
COL4A5P29400 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC8.03□□□□□ -1.12
COL4A5P29400 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL4A5P29400 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
COL4A5P29400 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.03□□□□□ -1.12
COL4A5P29400 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms